Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2401 ATGGTTGTATCCAAAAATTGGTTGAGAAACGTTCGAAGAAAATTCCTAAGATCATCCAACAGAGACATAACTCTCCCTCCTCGTATAAGTGTTTGCACAAATCAAACCGAACAACCAATACTTGATAATGAATCAACCACCACCACAACCACCATCAGAGAAATTTTTATCAGTTTACCATCACCACCACCCATTAATTCTCTATCAACCAAATTATTCTCTAAGGAAGACTTTGCCGCAATAAAGATTCAAGCTCATTTCAGGGCTCATCTCGCAAGACGAGCACATAGGGCGTTGAAAAGTTTAGTGAAATTGCAAGCATTGATTCGTGGGGTGTATGTGAGGAGACAGTCACGTATAGCAATGCAGTGTATGCATGCACTTGTTCGTTTACAAGTTAGGGTTCGTGCAAGGCAATTGCTTGGTACCTTTGATCATACACAATAA 447 0.4004 MVVSKNWLRNVRRKFLRSSNRDITLPPRISVCTNQTEQPILDNESTTTTTTIREIFISLPSPPPINSLSTKLFSKEDFAAIKIQAHFRAHLARRAHRALKSLVKLQALIRGVYVRRQSRIAMQCMHALVRLQVRVRARQLLGTFDHTQ* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2401 148 ProSiteProfiles IQ motif profile. 76 104 IPR000048 GO:0005515
Psa4g2401 148 ProSiteProfiles IQ motif profile. 100 127 IPR000048 GO:0005515
Psa4g2401 148 PANTHER IQ-DOMAIN 5-RELATED 4 142 - -
Psa4g2401 148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 120 IPR027417 -
Psa4g2401 148 Gene3D - 75 129 - -
Psa4g2401 148 Pfam IQ calmodulin-binding motif 79 97 IPR000048 GO:0005515
Psa4g2401 148 PANTHER OS04G0561100 PROTEIN 4 142 - -
Psa4g2401 148 SMART iq_5 75 97 IPR000048 GO:0005515
Psa4g2401 148 SMART iq_5 98 119 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2401 Psa-Chr4 192705545 192706231 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2401 74 141 IQD Protein Family AT3G51380 76.471 2.71e-30 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2401 - - cam:101507643 163.696