Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2390 ATGAAATCACTCTTTCATCATGAATTAATTTGTTGGTGTTCTTTCATAGCCATCCTCTTACAACATGTTTCTTCTGTGAATCTACCAAACAATGAAACAGTGCCAGCAGTTTTTGTATTTGGTGACTCTTTAGTTGATCCAGGAAACAACAACTATATCACCACTATTATCAAATGTAATTTTCCACCATATGGTAGAGATTTCCAAGGAGGAAATCCAACTGGTAGATTCAGCAACGGTGTAGTCCCATCAGACATCATTGCTGAAAAATTTGAAGTCAAGAAGATTTTACCTGCTTATCTTGATCCTAATTTGCAACTTCAAGATCTCCTCACTGGTGTAAGCTTTGCCTCAGGTGGTGCTGGATATGATCCTCTAACTTCCAAAATAATGTCTGTGAAGTCATTATCAGATCAATTAGAATGGTTCAAGGAATACAAGAAGAAGATGGAGGAAGCAGTTGGGAGAAAGAATATGACATTGATAATATCAAAGAGCATATACATAGTGTGTATAGGCAGTGATGACATTGCTAATACTTATGCTCAAACACCATTTAGGCGTGTTCAATATGATATTCCATCCTACACAGATTTCATGGCTTCTAAAGCCTCAAAATTCTTGCAGGAACTATATGAAGAAGGAGGTAGAAGGATTGGAGTATTCAATATACCAGTTATAGGGTGTGTGCCATCACAAAGAACACTTAATGGGGGCCTTTTTAGAGAATGTTCAAATACTTCTAATAATGCAGCAAGACTCTTCAACACTAAGCTCTACTTCAAAATGAAAACACTTCAGAGAAATTATTCAGATGCTAAATTTGTGTATCTTGATTGTTACAATCCATTCATGGAGATGATTCAAAATCCTTCTAAATATGGTTTTAATGAGACAAAAAAAGGATGCTGTGGTACAGGGAATATAGAAGTTGGGATATTGTGCAATCGTTTCAGCATAAACACATGTTCAAATCCTTCGGATTACGTATTTTGGGATAGTTATCATCCTACGGAGAAGGCTTATTACGCACTTAGTACACTTGTGCTTGATAACAAAATCAAGGACTTCTTCTAA 1077 0.3603 MKSLFHHELICWCSFIAILLQHVSSVNLPNNETVPAVFVFGDSLVDPGNNNYITTIIKCNFPPYGRDFQGGNPTGRFSNGVVPSDIIAEKFEVKKILPAYLDPNLQLQDLLTGVSFASGGAGYDPLTSKIMSVKSLSDQLEWFKEYKKKMEEAVGRKNMTLIISKSIYIVCIGSDDIANTYAQTPFRRVQYDIPSYTDFMASKASKFLQELYEEGGRRIGVFNIPVIGCVPSQRTLNGGLFRECSNTSNNAARLFNTKLYFKMKTLQRNYSDAKFVYLDCYNPFMEMIQNPSKYGFNETKKGCCGTGNIEVGILCNRFSINTCSNPSDYVFWDSYHPTEKAYYALSTLVLDNKIKDFF* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2390 358 Pfam GDSL-like Lipase/Acylhydrolase 37 346 IPR001087 GO:0016788
Psa4g2390 358 CDD SGNH_plant_lipase_like 35 352 IPR035669 -
Psa4g2390 358 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 8 357 - -
Psa4g2390 358 PANTHER GDSL ESTERASE/LIPASE EXL3 8 357 - -
Psa4g2390 358 SUPERFAMILY SGNH hydrolase 37 351 - -
Psa4g2390 358 Gene3D SGNH hydrolase 22 353 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2390 Psa-Chr4 191991995 191993713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2390 13 353 Pollen Coat Proteome AT1G75910 40.805 3.04e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2390 - - ahf:112723705 542.347