Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2385 ATGGCTTTCATGGTTACATCATTCTTGAATTTCATTCTCTTGTTTTCTTTAGCTTCAACAGGGAACTCACTTAGTTATAACTACTATGAAAAGACATGTCCTGATGTAGAGTTCATTGTTGCCAAGACAGTGAGAGATGCCACTGCTTCGGACAAAACTGTCCCCGCAGCGCTTCTCCGATTGCACTTCCACGACTGCTTCATTCGGGGATGTGATGCTTCTGTGCTGCTAAACTCAAAAGGAAGCAACAAAGCAGAAAAAGATGGACCACCAAATTCTGGAGGTCCAGATTGGGATGTTCCTAAAGGAAGAAAGGATGGAAGAATATCCAAGGCAAGTGAAACCATACAGTTACCATCCCCATCTTTCAACGTATCGCAACTACAGAAGAGCTTCTCTCAAAGAGGTCTGTCATTGGAAGACTTGGTAGCTTTGTCAGGAGGACATACCTTAGGTTTCTCTCACTGCTCATCCTTCAGAAACAGAATCCATAACTTCAATGCTACACATGATGTGGACCCTTCATTAAATCCATCATTTGCATCAAAGCTAAAATCAATTTGTCCAATAAGAAACCAAATAAAGAATGCAGGCACCACCTTGGATGCTTCTTCAACTACATTTGACAATACATATTACAAGTTGATCCTCCAAGGGAAGGCCATATTTTCTTCTGATCAAGTTCTTATTGATACTCCAAATACCAAAAATCTTGTTTCAAAGTTTGCTACCTCACAAGATGCATTTTATAAGGCTTTTGTGAAGTCTATGGTCAAAATGAGCAGCATCAATGGTGGCCAAGAGATTAGGAAGGACTGTAGAGTGGTTAATTAG 834 0.4041 MAFMVTSFLNFILLFSLASTGNSLSYNYYEKTCPDVEFIVAKTVRDATASDKTVPAALLRLHFHDCFIRGCDASVLLNSKGSNKAEKDGPPNSGGPDWDVPKGRKDGRISKASETIQLPSPSFNVSQLQKSFSQRGLSLEDLVALSGGHTLGFSHCSSFRNRIHNFNATHDVDPSLNPSFASKLKSICPIRNQIKNAGTTLDASSTTFDNTYYKLILQGKAIFSSDQVLIDTPNTKNLVSKFATSQDAFYKAFVKSMVKMSSINGGQEIRKDCRVVN* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2385 277 CDD secretory_peroxidase 24 276 IPR033905 GO:0004601|GO:0042744
Psa4g2385 277 Gene3D - 24 93 - -
Psa4g2385 277 Gene3D - 94 277 - -
Psa4g2385 277 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa4g2385 277 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa4g2385 277 PRINTS Plant peroxidase signature 215 232 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa4g2385 277 PRINTS Plant peroxidase signature 255 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa4g2385 277 ProSiteProfiles Plant heme peroxidase family profile. 23 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa4g2385 277 ProSitePatterns Peroxidases proximal heme-ligand signature. 141 151 IPR019793 -
Psa4g2385 277 MobiDBLite consensus disorder prediction 82 102 - -
Psa4g2385 277 SUPERFAMILY Heme-dependent peroxidases 24 277 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa4g2385 277 Pfam Peroxidase 92 245 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa4g2385 277 PANTHER PEROXIDASE 7 92 - -
Psa4g2385 277 PANTHER PEROXIDASE 93 276 - -
Psa4g2385 277 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa4g2385 277 PRINTS Haem peroxidase superfamily signature 94 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa4g2385 277 PRINTS Haem peroxidase superfamily signature 141 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa4g2385 277 PRINTS Haem peroxidase superfamily signature 201 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa4g2385 277 PANTHER PEROXIDASE 25-RELATED 93 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa4g2385 277 PANTHER PEROXIDASE 25-RELATED 7 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa4g2385 277 Gene3D Peroxidase, domain 2 119 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2385 Psa-Chr4 191848877 191850834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2385 9 276 Peroxidase AT5G42180 54.369 9.59e-125 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2385 K00430 - gmx:102665908 447.203