Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2373 ATGATGAACCTTTCCACCTCCAAATCTTTTTATGTTTGTTCTTTCCTAGTTTTGTTTTATCCATTTCTTGTGACAGCTACATTTAAATCTGGGTATAAAAACTATTCATTTCCTGCTGTTATTGCATTTGGTGATTCCGTCTTGGATACGGGTAACAACAACTATATTCAAACAGTAGTGAAGTCGGATTTCAAACCATATGGGCAAGATTTTATCGGAGGAAAACCGACAGGAAGATTTAGCAACGGAAAAATCCCGGCAGATATTTTTGCTGAATACTTCGGAATTAAGGAGCTCGTGCCGCCATATCTCGATCCGAATTTGACAACTGAAGAACTGTTAACTGGAGTGTGTTTTGCGTCGGCTGGTTCAGGATATGATCCTCTAACAATTGAAATAGCATCAGTGTTGTCAGCAGAGGATCAACTAGAAATGTTCAAGGAGTATATAGCAAAATTGAAGGAAGCTGTGGGGGGAAATAGAACAACTGAGATTATAGAAAATAGCATATTTATCATAAGTATGGGAAGCAATGATATTGCAGGAACATATTTTACGTCACCATTCAGAAAAGATGAATATGATATAGAAAAATATACAAGTATGCTGATTAGTGAATCTTCAAAATTTGTTGAGGAACTTTATCAATTGGGAGCTAGAAGGATTGGAGTATTCAGTTTATCACCATTAGGATGTGTGCCACTGCAAAGAACTGTGAAAGGAGGCATAGAGAGGGATTGTGTAGAAATTATAAATGAGGGAGCATTGATTTTCAACTCCAAGCTTTCTTCTTCCCTTGTGGATCTAGCAAAAAAACTTGAAGATTCTAGGCTTGTCTACCTTGAAAATTATATTGAATTGCATGACATTATCATAAATCACAATCAGTATGGATTTGAAAATGAGGATGGTTCATGCTGTGGAATTGCAAATGTAGAACTTGGTCCGCTTTGTAGTTCTTTGACGTTAAAAGTTTGTGCAAATACATCTGAATATGTATTCTGGGATAGTTATCACCCCACAGAAAGAGCTTACGAAATACTTGTCAAACAAGTCTTGGATAACAAGATAGATGAATTTCTTTGA 1086 0.3619 MMNLSTSKSFYVCSFLVLFYPFLVTATFKSGYKNYSFPAVIAFGDSVLDTGNNNYIQTVVKSDFKPYGQDFIGGKPTGRFSNGKIPADIFAEYFGIKELVPPYLDPNLTTEELLTGVCFASAGSGYDPLTIEIASVLSAEDQLEMFKEYIAKLKEAVGGNRTTEIIENSIFIISMGSNDIAGTYFTSPFRKDEYDIEKYTSMLISESSKFVEELYQLGARRIGVFSLSPLGCVPLQRTVKGGIERDCVEIINEGALIFNSKLSSSLVDLAKKLEDSRLVYLENYIELHDIIINHNQYGFENEDGSCCGIANVELGPLCSSLTLKVCANTSEYVFWDSYHPTERAYEILVKQVLDNKIDEFL* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2373 361 CDD SGNH_plant_lipase_like 38 355 IPR035669 -
Psa4g2373 361 Gene3D SGNH hydrolase 28 357 IPR036514 -
Psa4g2373 361 Coils Coil 136 156 - -
Psa4g2373 361 Pfam GDSL-like Lipase/Acylhydrolase 40 351 IPR001087 GO:0016788
Psa4g2373 361 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 360 - -
Psa4g2373 361 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 40 51 IPR008265 GO:0006629|GO:0016298
Psa4g2373 361 PANTHER GDSL ESTERASE/LIPASE EXL3 2 360 - -
Psa4g2373 361 SUPERFAMILY SGNH hydrolase 40 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2373 Psa-Chr4 191571414 191573307 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2373 12 355 Pollen Coat Proteome AT1G75910 37.822 3.54e-82 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2373 - - mtr:MTR_8g075200 591.267