Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2358 ATGATACATTTAATCTGCTTGGTCGAGGTTTCTTATGGGGTTGGTTTGACAACAACAGTTACTTCAGATCAAGAAATAGGAGAAAGAAGACTAGAAGATGGGGCAATGGTTCTTGCTGACAGAGGTGTTGTCTGCATTGATGAATTTGGAAAAATGAATGACCAAGATCGTGTAGCTATACACGAAGTTATGGAACAGCAGACTGTAACAATTGCTAAAGTTGAGATCTATGCATCACTTAATCCTCGTTGTGGTGTAGTTGCGGCTGCAAATCCCATATATGAAACTTATGATCGTTCACTGAATCCAACTAAATATTGGACTCTCATACTCGCTGACGGCGACGCCACTGTTGGTTTCCCCACCGCCGCGTTGGCGATGCCAAAGATAGAAGACACAGAAGATGAAGTGGTTACCGATCCTAGGAATTCTCGTTAG 438 0.4269 MIHLICLVEVSYGVGLTTTVTSDQEIGERRLEDGAMVLADRGVVCIDEFGKMNDQDRVAIHEVMEQQTVTIAKVEIYASLNPRCGVVAAANPIYETYDRSLNPTKYWTLILADGDATVGFPTAALAMPKIEDTEDEVVTDPRNSR* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2358 145 Gene3D - 5 110 IPR027417 -
Psa4g2358 145 PRINTS Mini-chromosome maintenance (MCM) protein family signature 34 48 IPR001208 GO:0003677|GO:0005524|GO:0032508
Psa4g2358 145 PRINTS Mini-chromosome maintenance (MCM) protein family signature 62 75 IPR001208 GO:0003677|GO:0005524|GO:0032508
Psa4g2358 145 PRINTS Mini-chromosome maintenance (MCM) protein family signature 86 98 IPR001208 GO:0003677|GO:0005524|GO:0032508
Psa4g2358 145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 96 IPR027417 -
Psa4g2358 145 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 11 106 IPR031327 GO:0003677|GO:0005524|GO:0032508
Psa4g2358 145 Pfam MCM P-loop domain 10 104 IPR001208 GO:0003677|GO:0005524|GO:0032508
Psa4g2358 145 ProSiteProfiles MCM family domain profile. 11 105 IPR001208 GO:0003677|GO:0005524|GO:0032508
Psa4g2358 145 PANTHER DNA REPLICATION LICENSING FACTOR MCM3 HOMOLOG 3 11 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2358 Psa-Chr4 190790073 190791756 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2358 11 105 Core DNA Replication Machinery Family AT5G46280 84.211 4.12e-49 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2358 K02541 - cit:102621522 159.844