Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2347 ATGGGTTCTATTGAAATTCAAAGCTCAGAGCCTGAGGTTGTCACCGTTGATGTTCTTGCAGCCAGGTCTCTCATCCAGACCACACATGTTTATCTTGATGTCAGAACGGTGGAAGAGTTTCAGAAAGGGCATGTGGATTCTGAGAAGATCGTTAACATTGCATACATGTTTAATACACCTGAGGGGAGGGTGAAGAACCCAGATTTTCTGAAGGAGGTTTTGTCTCTTTTCAAGAAAGAAGATCATCTCATAGTGGGTTGCCAAAGTGGAGTGAGATCTGTGTATGCAACTGTTGACCTTCTGGCTGAAGGGTTTAAGGATGTCTCCAACATGGGTGGAGGTTATCTGGATTGGGTTAAAAAGGGATTTCCTGTCAAGATACTTGTTACCAAATAG 396 0.4318 MGSIEIQSSEPEVVTVDVLAARSLIQTTHVYLDVRTVEEFQKGHVDSEKIVNIAYMFNTPEGRVKNPDFLKEVLSLFKKEDHLIVGCQSGVRSVYATVDLLAEGFKDVSNMGGGYLDWVKKGFPVKILVTK* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2347 131 Gene3D - 4 127 IPR036873 -
Psa4g2347 131 CDD RHOD 30 119 - -
Psa4g2347 131 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 12 125 IPR036873 -
Psa4g2347 131 PANTHER THIOSULFATE SULFURTRANSFERASE 18 8 126 IPR044684 GO:0003824
Psa4g2347 131 PANTHER THIOSULFATE SULFURTRANSFERASE 18 8 126 - -
Psa4g2347 131 SMART rhod_4 16 124 IPR001763 -
Psa4g2347 131 ProSiteProfiles Rhodanese domain profile. 29 127 IPR001763 -
Psa4g2347 131 Pfam Rhodanese-like domain 29 120 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2347 Psa-Chr4 189809751 189812191 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2347 3 125 Sulfurtransferasese or Rhodanese AT5G66170 55.285 7.39e-49 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2347 - K15692 cam:101497130 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2347 4 189809751 189812191 Psa4g2347 4 189809751 189812191 ECH
Psa2g3490 2 383814758 383816936 Psa4g2347 4 189809751 189812191 PCT
Psa2g3438 2 381668208 381669407 Psa4g2347 4 189809751 189812191 PCT