Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2285 ATGGATTTACTTCACCAAGCAAAAACCACACTAGAACCATTCACAACACTATTATGGATCATTCTCCCACTCACTATGTTTCTACTACTAAACCTATCCTCAAAAATCCGAAAAAGATTACCCTATCCACCAGGACCAAAAGGGTTACCCTTAATAGGTAACATGAACATGATGGACAAACTCACACACAGAGGCTTAGCAAAATTATCAAAACAATACGGCGGCGTTTTGCACCTCCGCATGGGGTTTATCCACATGGTAGCAATCTCAAACGCAGAAGCAGCGCGTGAAGTGTTACAATTGCATGACAACATATTCTCGAATCGCCCCGCGACGATAGCCATAAGTTACCTTACTTATAATCGCGCTGACATGGCGTTCGCTCACTACGGTCCGTTTTGGCGCCAAATGCGGAAGCTCTGCGTCGTGAAACTCTTCAGCCGTAAACGCGCGGAGTCGTGGGAATCGGTTAGAGATGAAGTTGACGTTGTTGTCACCAACGTTAACGAGAACTTGGGAAAGTCAGTTAACGTTGGTGAGTTGGTTTTTAATTTAACAAAGAATATTATCTATCGCGCGGCCTTTGGGTCGAGTTCGAAAGAAGGACAAGACGAGTTTATTTCGATACTTCAAGAGTTTTCGAAATTGTTTGGTGCTTTTAATATTGCGGATTTTGTTCCTTGGTTGAGGTGGGTTGATCCTCAAGGATTGAATGCTAGGCTCGTTAAGGCTCGTGTGAATGATGAATCAGATGATCTTCATAATTCTATCAAACTCACTAGGGATAACATCAAAGCCATCATCATGGATGTCATGTTCGGCGGAACAGAAACGGTTGCATCAGCAATGGAATGGGCTATGTCGGAACTACTAAGAAATCCTGAAGATCTCAAGCGCGTGCAACAAGAACTCGGCGCCGTGGTTGGCCTAGACCGGCGCGTGGAAGAATCCGACATAGAGAAACTGACATACCTAAAATGTGTCGTCAAGGAGACGCTTCGTCTTCACCCGCCGATTCCGCTTCTCCTCCACGAGACAGCGGAAGACTCGACGGAGACGCTTCGTCTTCACCCGCCGATTCCGCTTCTCCTCCACGAGACAGCGGAAGACTCGACGGTTGGTGGTTACTACATTCCGAAAGGCTCGCGCGTGATGATAAACGCGTGGGCTATCGGAAGAGATGGACTTTCATGGAAGGATCCGGAAGAGTTCAAGCCTTCAAGATTTTTAAATTCAAGTGCACCTGATTTTAAAGGAAGTAACTTCGAGTTTATTCCATTCGGGTCGGGTCGAAGATCTTGCCCCGGAATGCAATTGGGCCTGTATGCATTGGATTTGGCTTTGGCCCATTTACTTCATTGTTTTAGTTGGGAGTTACCTAATGGAATGAAACCTAGTGAGATGGATACGAGTGATGTTTTTGGACTCACTGCTCCAAGAGCGAGTCGACTCATTGCTGTTCCAGCTAAGCGTCTTGTGTGCCCTCTCTGA 1491 0.4621 MDLLHQAKTTLEPFTTLLWIILPLTMFLLLNLSSKIRKRLPYPPGPKGLPLIGNMNMMDKLTHRGLAKLSKQYGGVLHLRMGFIHMVAISNAEAAREVLQLHDNIFSNRPATIAISYLTYNRADMAFAHYGPFWRQMRKLCVVKLFSRKRAESWESVRDEVDVVVTNVNENLGKSVNVGELVFNLTKNIIYRAAFGSSSKEGQDEFISILQEFSKLFGAFNIADFVPWLRWVDPQGLNARLVKARVNDESDDLHNSIKLTRDNIKAIIMDVMFGGTETVASAMEWAMSELLRNPEDLKRVQQELGAVVGLDRRVEESDIEKLTYLKCVVKETLRLHPPIPLLLHETAEDSTETLRLHPPIPLLLHETAEDSTVGGYYIPKGSRVMINAWAIGRDGLSWKDPEEFKPSRFLNSSAPDFKGSNFEFIPFGSGRRSCPGMQLGLYALDLALAHLLHCFSWELPNGMKPSEMDTSDVFGLTAPRASRLIAVPAKRLVCPL* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2285 496 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2285 496 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2285 496 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2285 496 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2285 496 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2285 496 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2285 496 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 352 496 - -
Psa4g2285 496 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 244 351 - -
Psa4g2285 496 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 8 246 - -
Psa4g2285 496 Gene3D Cytochrome P450 33 351 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2285 496 PANTHER CYTOCHROME P450 84A1-RELATED 352 496 - -
Psa4g2285 496 PANTHER CYTOCHROME P450 84A1-RELATED 8 246 - -
Psa4g2285 496 PANTHER CYTOCHROME P450 84A1-RELATED 244 351 - -
Psa4g2285 496 SUPERFAMILY Cytochrome P450 352 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2285 496 Pfam Cytochrome P450 250 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2285 496 Pfam Cytochrome P450 43 233 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2285 496 Pfam Cytochrome P450 352 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2285 496 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2285 496 PRINTS P450 superfamily signature 327 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2285 496 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2285 496 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2285 496 SUPERFAMILY Cytochrome P450 43 350 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2285 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Psa4g2285 496 Gene3D Cytochrome P450 352 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2285 Psa-Chr4 186197572 186201488 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2285 50 496 Monolignol Biosynthesis Gene Families AT4G36220 66.397 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2285 K09755 - gmx:100807448 706.442