Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2260 ATGCTACTAGTAGACACTGTTGTAGAAAATAACAACAACAAAAATCAACACATTGATCCTACAATGAACAATATTGGCATGGAAGTTGAAGAGACAGTTAGAGAGTTGAGACAATACTTCAAAACAGGAAAAACAAAAAGTGTTGCATGGAGGAAAAACCAGCTCCAAGCTTTACTTAACCTTGTCCATGAAAATGAAGATGCTATATCTAAAGCTCTTTACCAAGATCTTGGAAAGCACCCTGTTGAAGCTTACCGCGACGAGATTGGAGGGGTGGAAAAATCAGCACAAAGCTCCTTGAACAGTGTTGAAAAATGGATGGCTCCTAAAAAGAGCAGCATGCCTCTTCTTTTCTTCCCTGCAAAAGGAGAGTTGTTGCCGGAACCACTTGGTGTGGTTCTTATTTTTTCATCTTGGAACTTTCCGATCGTGTTGGCATTGGATCCAATAATTGGGGCAATATCTGCTGGAAATGTTGTTCTGATTAAACCATCAGAGCAAGCTCCAGCATGCTCTTCTTTTCTTGCAAATACTCTTCCTCGCTACTTGGACAGTAACGCCGTCAAGGTCGTTGAGGGTGGAGGAGATGTCTGTGAAAAGCTTCTGCTACATAAATTTGACAAAATATTCTTCACTGGAAGTCCACGAGTGGCAAGCATAGTTATGACTTCTGCTGCAAGAAATTTAACTCCGGTGACTCTAGAGCTAGGTGGAAAATGTCCTGCTATATTTGATCACCTTTCCAATCCTTCAGATTTTAAGATGGCAGTAAAAAGAATAGTAGGAGCAAAGTGGGGAATCTGTAGTGGACAAGCATGTATAGGAATCGATTATGTGCTTGTTGAGGAGAAGTACTCGTCTGAATTGATAGAACTATTGAAGAAGTTTGTGAGAAGATTTTATGGTGATAACATGGTAGAGTCAAAGGTACTCTCAAGAATAGTAAACAAACAGCACTTTCAGAGATTGTGCAATCTTCTTAAAGACCCTCTTGTTGCTGCTTCAATAGTTCATGGTGGTTCAGTTGATGAAGCAAACCTGTTTATTGAGCCAACAATCTTGTTAGATCCACCACTAGATGCTGAAATCATGACAGAAGAAATCTTTGGTCCATTTCTTCCAGTGATCACAGTGAATAAAATTCAGGAAAGTATTGAATTTATAAACTCAAAACCAAAACCTCTTGCCATTTATGCATTCACCAAAGATGAAACTTTCAAGAGAAAGATTGTATCAGAAACATCCTCAGGAAGTGTCATATTTAATGACACACTGGTTCAATTTTTATGTGATACACTACCATTTGGAGGTGTTGGACAGAGTGGTATTGGTAGGTACCATGGGAAATTCTCCTTTGACACATTCAGCCATGAAAAAGCTGTAATGCATAGATACCTTTGCCTTGAAATTGAGCCAAGGTATCCTCCATGGAATAAATTTAAGCTAGAATTTATCAGACTGGCATACAGGTTCAACTACTTTGGACTAGCACTACACATGTTGGGCTTGAGAAAACAGAACTAG 1524 0.3917 MLLVDTVVENNNNKNQHIDPTMNNIGMEVEETVRELRQYFKTGKTKSVAWRKNQLQALLNLVHENEDAISKALYQDLGKHPVEAYRDEIGGVEKSAQSSLNSVEKWMAPKKSSMPLLFFPAKGELLPEPLGVVLIFSSWNFPIVLALDPIIGAISAGNVVLIKPSEQAPACSSFLANTLPRYLDSNAVKVVEGGGDVCEKLLLHKFDKIFFTGSPRVASIVMTSAARNLTPVTLELGGKCPAIFDHLSNPSDFKMAVKRIVGAKWGICSGQACIGIDYVLVEEKYSSELIELLKKFVRRFYGDNMVESKVLSRIVNKQHFQRLCNLLKDPLVAASIVHGGSVDEANLFIEPTILLDPPLDAEIMTEEIFGPFLPVITVNKIQESIEFINSKPKPLAIYAFTKDETFKRKIVSETSSGSVIFNDTLVQFLCDTLPFGGVGQSGIGRYHGKFSFDTFSHEKAVMHRYLCLEIEPRYPPWNKFKLEFIRLAYRFNYFGLALHMLGLRKQN* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2260 507 SUPERFAMILY ALDH-like 28 477 IPR016161 GO:0016491
Psa4g2260 507 Pfam Aldehyde dehydrogenase family 27 461 IPR015590 GO:0016491
Psa4g2260 507 PANTHER ALDEHYDE DEHYDROGENASE 30 505 IPR012394 GO:0006081
Psa4g2260 507 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER F1 30 505 - -
Psa4g2260 507 PIRSF ALDH 8 504 IPR012394 GO:0006081
Psa4g2260 507 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 37 459 IPR016162 GO:0016491
Psa4g2260 507 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 238 441 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2260 Psa-Chr4 183885407 183888813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2260 22 505 Aldehyde Dehydrogenase Gene Family AT4G36250 60.950 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2260 K00128 - gmx:100809812 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2260 4 183885407 183888813 Psa4g2260 4 183885407 183888813 ECH