Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2258 ATGGGAGAAAACTCTATACTTCAAATGAATGGAAACATGCATAAGAAACTTCATTCACTCCTTGGAGGCTTCCTTCGTTCTCCACAATTCAAAGCTCGAATCACAAAAGATATTCAGCAATGTGTTAAACAATGTTTAGCTACTTGGACTCATCACCAACCAATATACATCCAAGATCAAGTTAAAAAGATTACATTTACTATTTTGGTGAAAGTTCTGTTGAGCATTGATTCCGGTGAAGATTTATCTATATTGAAAAGAGAATTTGAAGAGTTCATCAAAGGATTAATTTGCTTGCCCGTTAAGTTTCCCGGAACAAGACTATATAAATCCTTGAAGGCTAAGGAGAGAATGATGACGATAGTGCAAAGGATAATAGAGGAAAGGAATGGTGATAATAAACATAAGGATTGTGTGGCAAATGATGTAGTGGATGTACTTTTAGAGGTTAATAAAGGTGAGTTGAAGAAGATGAGTGAGAATATAATTGAGATGATGATTCCTGGGGAAGAGACTCTTCCTACTGCCATGACCATGGCTGTTAAGTTTCTTAGTGACTCTCCTCATGCTCTATCCAAATTAGTGGAAGAGAACATGGAATTAAAGAGAAACAAGAGTTGTTCTGACGATTATACATGGACTGATTACTTGTCACTGCAATTTACTCAAAATGTAATCAATGAAACTCTTAGAATGGCAAATATTGTCAATGCCATTTGGAGAAAATCTATCAAAAATGTAGATATTAAAGGATACCTAATTCCTGAGAATTGGTGTGTTGTGGCATCTCTTACATCAGTTCATTTAGATGCCATGAACTATGAAAATCCTTTTGAATTTGATCCATGGAGATGGGAGAAAATTGAAGCTGGGACTAGAAATAACTGTTTTACACCATTTGGTGGAGGACAAAGATTATGTCCAGGGATAGAACTCTCTAGACTAGAGCTCTCTATTTTCCTTCACCATCTAGTTACAACTTACAGATGGGTTGCTGAGAGGGATGAAATTATTTACTTTCCAACGGTTAAGATGAAAAAGAAACTCCCAATTAGTGTGACACCACTAACACTTGATTAA 1080 0.3583 MGENSILQMNGNMHKKLHSLLGGFLRSPQFKARITKDIQQCVKQCLATWTHHQPIYIQDQVKKITFTILVKVLLSIDSGEDLSILKREFEEFIKGLICLPVKFPGTRLYKSLKAKERMMTIVQRIIEERNGDNKHKDCVANDVVDVLLEVNKGELKKMSENIIEMMIPGEETLPTAMTMAVKFLSDSPHALSKLVEENMELKRNKSCSDDYTWTDYLSLQFTQNVINETLRMANIVNAIWRKSIKNVDIKGYLIPENWCVVASLTSVHLDAMNYENPFEFDPWRWEKIEAGTRNNCFTPFGGGQRLCPGIELSRLELSIFLHHLVTTYRWVAERDEIIYFPTVKMKKKLPISVTPLTLD* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2258 359 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 300 309 IPR017972 GO:0005506|GO:0016705
Psa4g2258 359 Gene3D Cytochrome P450 1 356 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2258 359 Pfam Cytochrome P450 5 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2258 359 PRINTS E-class P450 group I signature 17 43 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2258 359 PRINTS E-class P450 group I signature 223 241 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2258 359 PRINTS E-class P450 group I signature 263 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2258 359 PRINTS E-class P450 group I signature 297 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2258 359 PRINTS E-class P450 group I signature 307 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2258 359 PANTHER CYTOCHROME P450 FAMILY BRASSINOSTEROID OXIDASE 1 353 - -
Psa4g2258 359 PRINTS P450 superfamily signature 168 185 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2258 359 PRINTS P450 superfamily signature 224 235 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2258 359 PRINTS P450 superfamily signature 298 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2258 359 PRINTS P450 superfamily signature 307 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2258 359 PANTHER CYTOCHROME P450 26 1 353 - -
Psa4g2258 359 SUPERFAMILY Cytochrome P450 3 355 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2258 Psa-Chr4 183814978 183821907 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2258 1 329 Cytochrome P450 AT3G13730 51.045 6.04e-125 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2258 K12637 - gmx:100812489 572.778