Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2245 ATGTCAACGGAAGCGCCCAAGCGCGACCAGTGGCAATGGGAGAATGCCATCGCCGGTGCCGCCGCCGGATTCGCTACCGTCGCCGTCATGCATCCCCTAGACGTTGTCCGAACTAGGTTTCAAGTTAACGATGGTCGAGTCTCACATCTTCCCGGTTACAAGAACACCGCTCACGCAATTTTCACCATTACTCGCTCCGAGGGATTAAGAGGGCTATATGCAGGCTTTCTTCCTGGGGTTCTTGGGTCAACTATATCCTGGGGTTTATATTTCTTTTTCTATGACAAAGCTAAACAAAGATATGCTAGGAGCAGAGAGGAGAAGTTGAGCCCAGGTCTTCATCTTGCCTCAGCTGCGGAAGCAGGAGCTTTGGTTTGCTTCTGCACAAATCCTGTTTGGCTAGTGAAGACAAGATTGCAGCTTCAGACTCCTCTTCATCAGACACGACCTTACTCTGGGCTATATGATGCACTTAGGACCATAATGAGGGAAGAAGGATTTAGTGCACTTTACAGAGGGATTGTTCCCGGTTTATTTCTGGTCTCTCATGGTGCTATTCAGTTCACCGCCTATGAAGAGCTGCGTAAAACTATTGTTGATTTGAAGAGCAAGGGAAGTGAAATACAAAATCAAAACCCTGATCAACTCTTGAATTCTGTTGATTATGCTGTTCTTGGAGCAACATCAAAAGTTGCTGCAATACTCCTAACCTATCCATTTCAGGTTATCCGCTCCCGTTTGCAGCAACGACCCGGTGGTGATGGGATACCAAGATATAAGGACAGCTGGCATGTTGTGAAAGAAACTGCACGATTTGAAAGTGTCCGAGGTTTTTACAAGGGAATCACGCCAAACCTCTTGAAAAACGTTCCTGCTTCTTCAATTACATTTATTGTTTATGAAAATGTTCTAAAATTACTAAAACTAGCTAGAAAGAATGACTGA 945 0.4519 MSTEAPKRDQWQWENAIAGAAAGFATVAVMHPLDVVRTRFQVNDGRVSHLPGYKNTAHAIFTITRSEGLRGLYAGFLPGVLGSTISWGLYFFFYDKAKQRYARSREEKLSPGLHLASAAEAGALVCFCTNPVWLVKTRLQLQTPLHQTRPYSGLYDALRTIMREEGFSALYRGIVPGLFLVSHGAIQFTAYEELRKTIVDLKSKGSEIQNQNPDQLLNSVDYAVLGATSKVAAILLTYPFQVIRSRLQQRPGGDGIPRYKDSWHVVKETARFESVRGFYKGITPNLLKNVPASSITFIVYENVLKLLKLARKND* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2245 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 217 306 IPR018108 -
Psa4g2245 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
Psa4g2245 314 SUPERFAMILY Mitochondrial carrier 12 302 IPR023395 -
Psa4g2245 314 Gene3D Mitochondrial carrier domain 13 307 IPR023395 -
Psa4g2245 314 Coils Coil 191 211 - -
Psa4g2245 314 Pfam Mitochondrial carrier protein 220 308 IPR018108 -
Psa4g2245 314 Pfam Mitochondrial carrier protein 11 103 IPR018108 -
Psa4g2245 314 Pfam Mitochondrial carrier protein 109 199 IPR018108 -
Psa4g2245 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 197 IPR018108 -
Psa4g2245 314 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 309 IPR044712 GO:0006862|GO:0055085
Psa4g2245 314 PANTHER BNAA09G07970D PROTEIN 10 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2245 Psa-Chr4 180472415 180478277 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2245 32 307 Chloroplast and Mitochondria Gene Families AT2G47490 39.223 7.27e-50 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2245 K15115 - gmx:100809599 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2245 4 180472415 180478277 Psa4g2245 4 180472415 180478277 ECH