Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2242 ATGACCCATTCTATGACCTTTCTTATACTTTTTTCTTTACTAGCCTTTGCTCCTTTCTGCCTAGGTAACAAGAAAATAGGATCTTACCTTTATCCACAGTTTTACGACTATTCATGTCCACAAGCTCAGAATATTGTTAAGTCCATTCTTGCTAATGCTGTTGCGAAAGAGCCTCGTATAGCTGCTTCACTTTTGAGACTTCATTTCCATGATTGTTTTGTCAAGGCTGGTGGACCAAACTGGGAAGTGCCTTTAGGAAGAAGGGACTCACTAGGTGCAAGCTTAAGTGGTTCCAACCATAACATTCCAGCTCCAAACAACACATTTCAAACCATCTTAACTAAATTCAAACTTCAAGGACTTGACATTGTTGATCTTGTTGCACTTTCTGGGAGCCATACTATAGGAAACTCAAGGTGCACAAGCTTTAGGCAAAGACTCTACAACCAAACTGGAAACGGCAAGCAAGATTTCAGTCTTGAACAATACTATGCTAATGAATTACGCGCTAATTGTCCGAGATCGGGTGGTGACCAGAATCTGTTTTTCCTAGATTATGTGACACCAACAAAATTTGATAACAACTACTTCAAGAACTTGTTGGCTTACAAGGGACTATTGAGTTCTGATGAAGTATTGTTGACAAAGAATCAAGAATCGGCTGAGTTGGTGAAACTGTATGCGGAGAGAAATGATATTTTCTTTGAGCAATTTGCTAAGTCTATGATCAAGATGGGAAATGTATCTCCTTTGACAGGTTCAAGGGGACAGATTAGAACAAATTGCAGGGTGGTTAATACTTGGTGA 807 0.3941 MTHSMTFLILFSLLAFAPFCLGNKKIGSYLYPQFYDYSCPQAQNIVKSILANAVAKEPRIAASLLRLHFHDCFVKAGGPNWEVPLGRRDSLGASLSGSNHNIPAPNNTFQTILTKFKLQGLDIVDLVALSGSHTIGNSRCTSFRQRLYNQTGNGKQDFSLEQYYANELRANCPRSGGDQNLFFLDYVTPTKFDNNYFKNLLAYKGLLSSDEVLLTKNQESAELVKLYAERNDIFFEQFAKSMIKMGNVSPLTGSRGQIRTNCRVVNTW* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2242 268 Gene3D Peroxidase, domain 2 103 245 - -
Psa4g2242 268 Gene3D - 30 75 - -
Psa4g2242 268 Pfam Peroxidase 75 229 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa4g2242 268 Gene3D - 76 266 - -
Psa4g2242 268 PANTHER PEROXIDASE 5 74 - -
Psa4g2242 268 PANTHER PEROXIDASE 75 266 - -
Psa4g2242 268 CDD secretory_peroxidase 30 265 IPR033905 GO:0004601|GO:0042744
Psa4g2242 268 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa4g2242 268 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa4g2242 268 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa4g2242 268 PANTHER PEROXIDASE 72-RELATED 75 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa4g2242 268 PANTHER PEROXIDASE 72-RELATED 5 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa4g2242 268 SUPERFAMILY Heme-dependent peroxidases 30 266 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa4g2242 268 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Psa4g2242 268 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa4g2242 268 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa4g2242 268 PRINTS Plant peroxidase signature 119 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa4g2242 268 ProSiteProfiles Plant heme peroxidase family profile. 29 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa4g2242 268 ProSitePatterns Peroxidases proximal heme-ligand signature. 125 135 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2242 Psa-Chr4 180083122 180084637 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2242 1 76 Peroxidase AT5G66390 62.025 2.13e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2242 K00430 - gmx:100777733 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2242 4 180083122 180084637 Psa4g2242 4 180083122 180084637 ECH
Psa2g3572 2 389073290 389074635 Psa4g2242 4 180083122 180084637 ECH