Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2229 ATGTGGAATCTATTAGGGGAAGAACTAGTAATGGTGGTGCAAAACTATTATGACATAATCACTATCTTATTTCTCTCTATAGGATTAACATATTTAGCATCAAGAGCTTGGAAAAGAGCTACAAACATGAGAGAAGACATCCCTGGCCGGCTTGGATTACCTCTTATTGGTGAAACTTTCTCTTTTCTTTCGGCCACTAATAGTACAAGAGGATGCTATGATTTTGTCAGACTTAGACGATTGTGGCACGGGAGATGGTTCAAGACAAGGCTATTTGGCAAGATTCACATATTTATTCCTAATCCAGAAGGTGCAAGGACAATATTTGCTAATGACTTTGATCTATTCAACAAGGGCTATGTAAAATCAATGGCAGATGCAGTAGGAAAGAAAAGCTTATTGTGTGTACCAGTTGAAAACCACAAAAGAATAAGGCGTCTTCTATCTGAACCATTCTCCATGACTTCCTTATCTGCATTTATCACAAAGTTTGACAAAATGTTGTGTGGAAGGCTGCAAAAGCTAGAAGAAAAGGGGAAAAGTTTTAAGGTGTTGGATTTCTCCATGAAGATGACATTTGATGCAATGTGCGATATGCTGATGAGCATCACAGAGGATTCATTACTACGACAGATCGAGAAAGACTGCACTGCTGTCTCTGATGCCATGTTGTCCTTTCCAGTCATGATTCCAGGCACAAGATACTATAAAGGCATAATGGGTCGTAAAAGGCTCATGGAGACCTTCAGAGATATCATTGTTAGACGTAGGACAGGAGAAGAGTCTCCAGGGGACTTCCTGCAGTCCATGTTGCAGAGAGACTCATTTCCAGACAGTGAAAAGCTTGATGACTCGGAAATTATGGATAATCTTTTGACATTGATAATTGCGGGACAGACTACAACAGCAGCAGCAATGATGTGGAGTGTAAAATTCCTACATGACAACAGAGATGCACAGGACATACTCAGGGACGAACAGTTGTCTTTAGCCAAAATTAAGCCAGAAGGAGCTTCACTTAATCATGAAGATATCAACAACATGCTTTACGGTTTAAAGGTAGTTAAGGAAACACTAAGAATGTCCAATGTCCTATTATGGTTTCCTCGTGTTGCACTTAACGACTGTACAATTGAAGGGTATGAAATAAAGAAAGGCTGGCACGTTAACATTGATGCGACTTGTATACATTACGATTCAGATCTATTCAAGGATCCACTGAAATTTAATCCACAAAGATTTGATGAAATGCAAAAGCCCTACAGTTTTATACCTTTTGGATCAGGGCCTAGGACTTGCCTTGGGATGAATATGGCAAAAGTGACAATGTTAGTCTTTTTACACAGACTAACTAGTTGTTACACGTGGACCCTTGATGATTTAGATACTTGCTTAGAAAAGAAGGCACACATACCTAGACTAAGGAGTGGATGTCCAATAACGCTGAAGTCCATAAGCAAGAGCATAACAGAGGCATAG 1479 0.3969 MWNLLGEELVMVVQNYYDIITILFLSIGLTYLASRAWKRATNMREDIPGRLGLPLIGETFSFLSATNSTRGCYDFVRLRRLWHGRWFKTRLFGKIHIFIPNPEGARTIFANDFDLFNKGYVKSMADAVGKKSLLCVPVENHKRIRRLLSEPFSMTSLSAFITKFDKMLCGRLQKLEEKGKSFKVLDFSMKMTFDAMCDMLMSITEDSLLRQIEKDCTAVSDAMLSFPVMIPGTRYYKGIMGRKRLMETFRDIIVRRRTGEESPGDFLQSMLQRDSFPDSEKLDDSEIMDNLLTLIIAGQTTTAAAMMWSVKFLHDNRDAQDILRDEQLSLAKIKPEGASLNHEDINNMLYGLKVVKETLRMSNVLLWFPRVALNDCTIEGYEIKKGWHVNIDATCIHYDSDLFKDPLKFNPQRFDEMQKPYSFIPFGSGPRTCLGMNMAKVTMLVFLHRLTSCYTWTLDDLDTCLEKKAHIPRLRSGCPITLKSISKSITEA* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2229 492 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2229 492 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2229 492 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2229 492 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2229 492 SUPERFAMILY Cytochrome P450 46 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2229 492 Pfam Cytochrome P450 52 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2229 492 PANTHER CYTOCHROME P450 FAMILY PROTEIN 20 485 - -
Psa4g2229 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Psa4g2229 492 Gene3D Cytochrome P450 38 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2229 492 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2229 492 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2229 492 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2229 492 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g2229 492 PANTHER CYTOCHROME P450 26 20 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2229 Psa-Chr4 179651528 179657084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2229 48 457 Cytochrome P450 AT1G19630 45.169 1.23e-125 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2229 - - gmx:100789430 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2229 4 179651528 179657084 Psa4g2229 4 179651528 179657084 ECH