Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2175 GTGATTTATTACAAAATACAACAGTCTGCACCAGTGAACATTATTGTTGGTTCTCATGTCTGGGTAGAAGATCCAGCACTAGCATGGATTTCTAGTGAAATTACTAAAATTAGTGAATTTACTTTTACTTCATCAATCACTTCCTACGACGGAATTCATTTCGAGTCAAAACTTGATGAGAAACAAGCAGCAATTGCGGCTTCAATAGCATTGTCCGAAAAGCCAAATGCCACGGCTTCTGCTGCAGTTGCTTCTGCAGCTTCTTTAGTAGTTTCTCACTGCATTGAGATTGTAGAAGATATGGGAGTTGAACAAGATCATATCGTAACCATAGCCGACTCAGTTATTAACAAAAAAATCAAGAGAGATATTATGACTCTTACTGCTGGAGCATTCACATGTATTATAATTTAG 414 0.372 VIYYKIQQSAPVNIIVGSHVWVEDPALAWISSEITKISEFTFTSSITSYDGIHFESKLDEKQAAIAASIALSEKPNATASAAVASAASLVVSHCIEIVEDMGVEQDHIVTIADSVINKKIKRDIMTLTAGAFTCIII* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2175 137 PANTHER PHOSPHOINOSITIDE BINDING PROTEIN 64 134 - -
Psa4g2175 137 Pfam Auxin canalisation 63 134 IPR008546 -
Psa4g2175 137 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 15 66 IPR004009 GO:0003774|GO:0005524|GO:0016459
Psa4g2175 137 PANTHER EXPRESSED PROTEIN 64 134 IPR040269 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2175 Psa-Chr4 175736378 175741533 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2175 11 38 Myosins gene family AT1G08730 71.429 1.23e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2175 - - mtr:MTR_3g110182 87.0409