Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2146 ATGTCTCGCAACTCTTCACCTGATAACGCAACACCTGATAATGCTACTCCTGATGATGCTGATGGATCATCTTCACGGTCACAGCAAAAATCATCGCCTTCTGGAGAAGGAAACCAATCATCATCACATAAGGGAGGTTCATCAAATAATAATAAATCTTCCAATGGCAATAACAACAAGGGTGATGAGAGAACCGTAATAGTTGGAGCTGCTATTGCATCTGCATTATTCGTTCTTCTCTTTGTTGCTATCTGTTTCCTTTGTTGTAGGAAGAAGAGAAAAAATAATTACTATTATGGTCCTGGTCCTCATGGAGATCCTTCCCTTTCAAAAGACTACTTATTTCGTACTTCAGAGCAAGATCATTCGTCACAATGGAGTAGTTATTACCACAGTGGACCACATCCTCATCCAAATTGGCAAGGAGGTCCAGGTCCAGCTCCACATGGAATGGAACATGTAGTTAGAATTCAGCATACACCAAATGGAAGTGGAGTTTGGGGTTCACCGCATCCTATGATGCATAGCGGCGAAATGAGTGGAAACTATTCGTTTGGAATGGGTCCGCCGGGCGCTTTACCTCCTCCTTCTCCAGGCCTATCTCTTACTCTCAAGGGTGGTACATTCTCTTATGAGGAATTGGCGTCGGCTACTAAAGGTTTCGCTAATGAGAATATTATAGGGCAAGGTGGTTTTGGTTATGTTCATAAGGGAATATTGCCTAATGGAAAGGAAATTGCTGTCAAAAGTTTGAAATCGGGTAGTGGACAAGGCGAACGTGAGTTCCAAGCTGAGATTGATATTATTAGTCGTGTTCACCATCGTCATCTTGTTTCTCTTGTTGGATATTGTGTTTGTGGTGGACAAAGAATGTTGGTCTATGAATTTGTTCCTAATCAAACTTTGGAATATCACCTTCATGGAAAGGGTGTGCCTACCATGGATTGGCCTACTAGAATGAAAATTGCACTAGGATCTGCTAGAGGGCTTGCTTACCTTCATGAAGATTGTAGTCCTCGCATTATCCACCGTGATATTAAGGCTTCTAATGTTCTAATCGATGATAGCTTCGAAGCCAAGGTGGCTGATTTTGGATTGGCTAAGTTGACTAATGATACTAACACGCACGTCTCAACTCGTGTTATGGGAACATTCGGGTACATGGCACCAGAATATGCGTCTAGTGGAAAATTGACAGAGAAATCTGATGTTTTCTCATTTGGGGTCATGCTACTAGAACTCTTAACCGGGAAGAGACCTTTGGATTTAAGCAATGCCATGGATGAAAGTTTAGTTGACTGGGCTCGACCACTCTTGAGTCAAGCATTGGAAGAGGATGGAAACTTCACAGAGTTGGTGGACCCATTTTTGGAAGGAAACTACAACAATCAAGAAATGATAAGAATGGCAGCTTGTGCTTCTAGTAGCATTCGTCATTCCGCTAAGAAGCGTTCAAAAATGAGTCAGATAGTAAGAGCATTAGAAGGAGATGTGTCACTAGAAGATTTGAAGGAAGGGATAATGAAAACTCCATGCCATAGCAGTGTTTATACTTCTTCAGGCTCAGAGTATGATACAATCCAATACAATGCAGATATGATGAAGTTTAGACAAGCAATAATGTCAAGTCAAGAATTTGCTACCGGCGAAATCACTAGTAAGGAGATGGGTCATCACTAG 1680 0.4173 MSRNSSPDNATPDNATPDDADGSSSRSQQKSSPSGEGNQSSSHKGGSSNNNKSSNGNNNKGDERTVIVGAAIASALFVLLFVAICFLCCRKKRKNNYYYGPGPHGDPSLSKDYLFRTSEQDHSSQWSSYYHSGPHPHPNWQGGPGPAPHGMEHVVRIQHTPNGSGVWGSPHPMMHSGEMSGNYSFGMGPPGALPPPSPGLSLTLKGGTFSYEELASATKGFANENIIGQGGFGYVHKGILPNGKEIAVKSLKSGSGQGEREFQAEIDIISRVHHRHLVSLVGYCVCGGQRMLVYEFVPNQTLEYHLHGKGVPTMDWPTRMKIALGSARGLAYLHEDCSPRIIHRDIKASNVLIDDSFEAKVADFGLAKLTNDTNTHVSTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVMLLELLTGKRPLDLSNAMDESLVDWARPLLSQALEEDGNFTELVDPFLEGNYNNQEMIRMAACASSSIRHSAKKRSKMSQIVRALEGDVSLEDLKEGIMKTPCHSSVYTSSGSEYDTIQYNADMMKFRQAIMSSQEFATGEITSKEMGHH* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2146 559 ProSiteProfiles Protein kinase domain profile. 221 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2146 559 SUPERFAMILY Protein kinase-like (PK-like) 202 494 IPR011009 -
Psa4g2146 559 PANTHER RECEPTOR-LIKE KINASE 3 558 - -
Psa4g2146 559 SMART serkin_6 221 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2146 559 Gene3D Phosphorylase Kinase; domain 1 201 296 - -
Psa4g2146 559 Gene3D Transferase(Phosphotransferase) domain 1 297 508 - -
Psa4g2146 559 ProSitePatterns Protein kinases ATP-binding region signature. 227 249 IPR017441 GO:0005524
Psa4g2146 559 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 3 558 - -
Psa4g2146 559 Pfam Protein tyrosine and serine/threonine kinase 224 422 IPR001245 GO:0004672|GO:0006468
Psa4g2146 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 341 353 IPR008271 GO:0004672|GO:0006468
Psa4g2146 559 MobiDBLite consensus disorder prediction 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2146 Psa-Chr4 173001526 173005616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2146 30 538 Trihelix Transcription Factor Family AT1G70460 47.162 2.18e-143 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Psa4g2146 PK_Tyr_Ser-Thr 5.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2146 - - gmx:100805872 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3652 2 393169218 393174193 Psa4g2146 4 173001526 173005616 ECH
Psa4g2146 4 173001526 173005616 Psa4g2146 4 173001526 173005616 ECH
Psa2g3652 2 393169218 393174193 Psa4g2146 4 173001526 173005616 PCT