Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2141 ATGAGAGTTCCTCCTCCTGCAGTTTCCTCATCATCATCATCCTCCCCAAAACTCACTACCACCCAAAACACCATCCTCACCACTCCCAACCCAACGACCACCACGACCACCACCGCCACTTTGTGCTACGAGCCCCGCTCCGTTCTCGAACTCTGCCGTAGTCCTAGCCCTGAAAAGAAACCAACACAAGAACAAGAACATCTAGAAGTGGAAGAGGATCATGCTGCCTTGCCTAATTTGGATTGGTGGGACTCCATCATGAAGGATTTGGGTTTACAAGACGACTCCTCCACACCCATAATACCACTTTTGAAAAACACTAACACCCCCCACGAAAATTCTAACCCAACACCATGCATCCCTGAAATTTACCCAAACCCTTCTCAAGACCAATTTGATCAAACTCAAGATTTCACTTCTCTCTCAGATATTTACTCTAATAACCAAAACCTTCCCTATAATTACCCAAACACAAACACTAATCTGGATCATTTACTTCATGATTTCAATAACAACCAACACACCAACAATAATAATAACAATAGTAATTGGGATTTCATCGAAGAGCTTATTCGTGCCGCGGATTGTTTCGATAACAATCATCTTCAACTAGCTCAGGCCATATTGGAGCGGCTCAATCAACGGCTAAGATCTCCTTCTGGTAAACCGTTACACCGAGCAGCGTTTCATTTCAAAGACGCTCTTCAATCTCTTCTCTCCGGTTCGAACCGGACTAATCCTCCGCGTCTTTCTTCCATGGTGGAGATTGTTCAGACCATTAGAACGTTCAAGGCGTTTTCTGGAATTTCACCGATTCCTATGTTTTCTATTTTTACAACTAATCAAGCGTTACTGGAAGCGCTTCATGGATCGTCCTTTATGCATGTTGTTGATTTTGAAATCGGACTTGGAATTCAATATGCTTCTTTGATGAAAGAGATTGCTGAAAAGGCGGTTAACAGTTCGCCGCTTCTCCGTATCACCGCGGTTGTGCCGGAGGAGTACGCTGTTGAAAGCAGGCTTATTCGTGAGAATCTCAACCAGTTTGCGCACGACCTTGGGATTCGGGTGCAGGTTGATTTTGTACCGTTAAGGACTTTTGAAACGGTGTCGTTTAAGGCGGTTAGGTTTGTCGACGGTGAGAAGACTGCGATTCTGTTGACGCCGGCGATATTCTGCCGCCTTGGATCCGACGGTACAGCCGCGTTTCTCTCGGATGTTCGTAGGATAACTCCCGGTGTGGTGGTTTTTGTTGATGGTGAAGGATGGACAGAGGCGGCATCCGCGGCGTCGTTTCGTCGTGGAGTTGTGAATAGCTTGGAGTTCTACTCGATGATGCTGGAGTCGCTGGATGCGTCGGTGGCGGCGGGAGGTGGAGGAGAGTGGGCGCGGAGGATCGAGATGCTTCTTCTACGGCCGAAGATAATAGCGGCGGTGGAAGCTGCTGGAAGAAGAACAACACCGTGGCGAGAGGCGTTTTACGGTGCCGGAATGAGGCCGGTGCAGTTGAGTCAGTTTGCTGATTTTCAGGCAGAGTGCTTGCTCGCAAAGGTGCAAATCAGAGGCTTCCACGTGGCAAAACGACAAGCTGAGTTGGTGCTTTTCTGGCATGAGAGGGCCATGGTCGCCACGTCAGCTTGGCGGTGTTAG 1650 0.483 MRVPPPAVSSSSSSSPKLTTTQNTILTTPNPTTTTTTTATLCYEPRSVLELCRSPSPEKKPTQEQEHLEVEEDHAALPNLDWWDSIMKDLGLQDDSSTPIIPLLKNTNTPHENSNPTPCIPEIYPNPSQDQFDQTQDFTSLSDIYSNNQNLPYNYPNTNTNLDHLLHDFNNNQHTNNNNNNSNWDFIEELIRAADCFDNNHLQLAQAILERLNQRLRSPSGKPLHRAAFHFKDALQSLLSGSNRTNPPRLSSMVEIVQTIRTFKAFSGISPIPMFSIFTTNQALLEALHGSSFMHVVDFEIGLGIQYASLMKEIAEKAVNSSPLLRITAVVPEEYAVESRLIRENLNQFAHDLGIRVQVDFVPLRTFETVSFKAVRFVDGEKTAILLTPAIFCRLGSDGTAAFLSDVRRITPGVVVFVDGEGWTEAASAASFRRGVVNSLEFYSMMLESLDASVAAGGGGEWARRIEMLLLRPKIIAAVEAAGRRTTPWREAFYGAGMRPVQLSQFADFQAECLLAKVQIRGFHVAKRQAELVLFWHERAMVATSAWRC* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2141 549 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 14 548 IPR005202 -
Psa4g2141 549 MobiDBLite consensus disorder prediction 57 73 - -
Psa4g2141 549 Pfam GRAS domain family 187 548 IPR005202 -
Psa4g2141 549 MobiDBLite consensus disorder prediction 1 39 - -
Psa4g2141 549 ProSiteProfiles GRAS family profile. 177 548 IPR005202 -
Psa4g2141 549 PANTHER SCARECROW-LIKE PROTEIN 15 14 548 - -
Psa4g2141 549 MobiDBLite consensus disorder prediction 54 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2141 Psa-Chr4 170504194 170507121 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2141 67 548 GRAS Transcription Factor Family AT4G36710 55.397 4.62e-166 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Psa4g2141 GRAS 3.6e-86 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2141 - - cam:101510420 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2141 4 170504194 170507121 Psa4g2141 4 170504194 170507121 ECH