Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2140 ATGGGGACTAAGGAGGATAGCACAACTAAGCCTTCTAAATTATCTACTTCAACTCAAGAGGTACCGGTACCAACTGTACCGCCATCGTATCCAGATTGGTCAAACTCCATGCAGGCCTACTATAATCCTGGAGCTGCTCCGCCTCCTTATTATGCCTCGACTGTGGCTTCACCGACCCCGCATCCGTATATGTGGGGAGGCCAGCATCCTTTAATGGCGCCATATGGTACTCCGGTCCCGTATCCAGCTATGTACCCTCCTGGGAGTATCTATGCTCATCCTAGCATGGTAGTGACTCCGAGTGCTATGCACCAAACTACGGAGTTTGAAGGGAAGGGACCGGATGGAAAGGATAAGGATTCATCGAAAAAATCAAAGGGAAATTCTGCAAATGCATGTGCCAAAGCAGGAGAGAGTGGAAAGGCGGGCTCGGGTTCAGGCAATGATGGCTTTTCACAAAGTGGTGAAAGTGGTTCAGAGGGTTCATCAAATGCTAGTGATGAAAACCAACAGGAATCGGCTAGAAACAAGAAGGGAGGCTTTGACCTGATGCTTGTTGACGGAGCCAACGCACAGAACAATACTGCCGGACCCATTTCTCAATCACCGGTTACTGGAAACCCTGTTGTCTCGATGCCTGCAACTAATCTTAATATGGGAATGGACTTATGGAATGCATCTTCTGCTAGTGCTGAAGCCGCAAAAATGCGACACAGTCAATCTGGTGCTCATGGAGCCGGTGGACATGGTGAACAATGGATGCAACAAGATGACCGGGAGCTGAAAAGGCAGAAGAGAAAACAGTCGAATCGGGAGTCGGCGAGGAGGTCTAGACTGCGCAAGCAGGTAAGTTTATGTTCACTTGAGGGGTTTGCTTAA 879 0.4903 MGTKEDSTTKPSKLSTSTQEVPVPTVPPSYPDWSNSMQAYYNPGAAPPPYYASTVASPTPHPYMWGGQHPLMAPYGTPVPYPAMYPPGSIYAHPSMVVTPSAMHQTTEFEGKGPDGKDKDSSKKSKGNSANACAKAGESGKAGSGSGNDGFSQSGESGSEGSSNASDENQQESARNKKGGFDLMLVDGANAQNNTAGPISQSPVTGNPVVSMPATNLNMGMDLWNASSASAEAAKMRHSQSGAHGAGGHGEQWMQQDDRELKRQKRKQSNRESARRSRLRKQVSLCSLEGFA* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2140 292 MobiDBLite consensus disorder prediction 188 211 - -
Psa4g2140 292 MobiDBLite consensus disorder prediction 1 25 - -
Psa4g2140 292 MobiDBLite consensus disorder prediction 110 125 - -
Psa4g2140 292 PANTHER G-BOX-BINDING FACTOR 1 1 283 - -
Psa4g2140 292 Gene3D - 261 290 - -
Psa4g2140 292 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 283 IPR044827 GO:0003700|GO:0006355|GO:0043565
Psa4g2140 292 MobiDBLite consensus disorder prediction 1 23 - -
Psa4g2140 292 Pfam bZIP transcription factor 259 289 IPR004827 GO:0003700|GO:0006355
Psa4g2140 292 MobiDBLite consensus disorder prediction 145 170 - -
Psa4g2140 292 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 265 280 IPR004827 GO:0003700|GO:0006355
Psa4g2140 292 MobiDBLite consensus disorder prediction 228 281 - -
Psa4g2140 292 MobiDBLite consensus disorder prediction 106 211 - -
Psa4g2140 292 CDD bZIP_plant_GBF1 263 289 IPR045314 GO:0003700|GO:0006355
Psa4g2140 292 SUPERFAMILY Leucine zipper domain 261 289 IPR046347 GO:0003700|GO:0006355
Psa4g2140 292 MobiDBLite consensus disorder prediction 253 267 - -
Psa4g2140 292 Pfam G-box binding protein MFMR 1 96 IPR012900 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2140 1 289 bZIP Transcription Factor Family AT4G36730 48.639 4.47e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa4g2140 MFMR 4.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2140 K09060 - gmx:778191 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2140 4 170399442 170402394 Psa4g2140 4 170399442 170402394 ECH