Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2139 ATGTTTCATCATCATCATCATCGCCATCATCACAATTCAAAGCTTTCTATTCTCATCATCATCACAATCTTCATAACAGTAATAACTGCTGATCAAAACAACAATCACTGCAACAGAAGATGCGGAGAACAATCCGTGAACTACCCATTCGGATTCTCAGAAGGTTGCAAAATCAAATTAAACTGCAGCAACAACAACAATCAAATCAAAATTGGCGACTTAACTGTTCAAAAACTGAACTCTGATAGCATATTCATATCTCTACCAGCGAAATGCAACCGTAACACCAGTTTCATATACCCGCTTTTCGGCAAAAACTATGCTCCAACATGGAACAACACCTTCCTCGTTCAGAGATGTAGACCAAATCTTAGCGGTTGTGTTATTCCAACTTCGATTTTTGCTGGAACACAAATAGATGTTGAAGGTTGTGGTTCGAGAAGTAAAAGTGATTACATCACTTGCTTCACGCAATCGCAGCGTAAAACATCGCGTGAGGATGTTCTTACGCCTGATGATTGGAATAAAACTGGATGTGAATTGTTGTTCTCGGCTATTGCTGTTGATAACAGCACAGTCGATGATGTTCCGCTTCAGTTTCAGGTGGTAGAGTTAGGGTGGTGGCTTGAAGGTTCTAGTTCATGTTCTGATGATGCTAATTGTACGGTGGTTCATCTTGCCGGAGAAAAACAAGGTTTCCGGTGTCGTTGCCGTGAAGGTTTAGTCGGAGATGGATTTGTAAACGGTACTGGTTGCCGGAGAGCTTCACATTGCAGTCTTTCAACACTTGGGTCTAGCAAATGTGCAAAAGCACTCAGAATTGGTTTACTTCTTGGAGTGATCATAGTCGGAGCCTTAGTGACGGCTGCACTGTCTCTAGTATGCTACTTCACAAATCGCCGATCGACATGGCTAACAAAACAATTGACAGTAAGGCGCCTATTAAGAGAAGCTGCAGGAAACTACATTGTTCCTCTCTACCCTTACAAAGAAGTAGAAAGGGCCACAAATTTTTTCTCTGAGAAACACAGGCTAGGAACTGGTGCTTACGGCACGGTATATGCAGGAAACCTTCACAACAATGAATTGGTTGCTATAAAAAAGATCAGGTATAGAGACACCAACAGTGTTGACCAAGTCATGAATGAAATCAAACTCCTTTCTTCGGTAAGTCACCCGAATTTAGTTCGACTTTTAGGTTGCTGCATAGAAAAAGGAGAACACATACTTGTTTATGAGTATATGCCAAATGGAACACTATCTCAACATTTACAAAGGGAAAGAGGTGGAACGCTTCCTTGGACAATAAGACTCACCATTGCCTCTGAAACTGCTAACGCTGTAGCATTTCTTCATTCTTCAAATCCTCCGATTTATCATAGAGACATAAAATCTAGTAACATACTATTGGACTTCAGTTTTCAATCAAAAGTAGCAGATTTCGGACTTTCTAGGCTTGGCATGACAGAAATATCACATATCTCAACCGCCCCACAAGGGACTCCAGGTTATGTTGATCCACAATACCATCAAAACTTTCATCTTTCTGATAAAAGTGATGTCTATAGTTTCGGTGTTGTCTTGGTAGAGATAATAACAGCGATGAAAGTGGTTGATTTTGGTAGACCTCAAAGTGAGATTAATTTGGCAGCGCTTGCTGTTGAAAAGATTAGGAAAGGCCGTGTCGACGACATCATAGATCCTTTCCTTGATCTTAATAGAGATGCATGGACACTCTATTCTGTTAACAAGGTAGCTGAGCTTGCATTTAGATGCCTTGCTTTTCATAGCGAATCGAGGCCTAATATGATTGAAGTTGCTGAGGAGTTAGATCATATCAGGCGTAGCGGATGGGCGACGATGGAGGAAACTATATGCTTGGGCTCATCGGTTGGATCCGGGTGTTCATCTCCTCGTTATAATGGAAATGAGAATTTAGCCTCAAAGCATGAGATATTGGTTGTTCCACAAAAGAGTAACAGTTTTTTGCATACAATAGAGGAAGTGAAGGATAGTTCCCCTGTATCTGTTCATGGTACTTGGTCAAGTAGACCTAGTTCACCTTCAACAAACAGCTTGTTAGGAAATGTTGTTCAGTGA 2100 0.4105 MFHHHHHRHHHNSKLSILIIITIFITVITADQNNNHCNRRCGEQSVNYPFGFSEGCKIKLNCSNNNNQIKIGDLTVQKLNSDSIFISLPAKCNRNTSFIYPLFGKNYAPTWNNTFLVQRCRPNLSGCVIPTSIFAGTQIDVEGCGSRSKSDYITCFTQSQRKTSREDVLTPDDWNKTGCELLFSAIAVDNSTVDDVPLQFQVVELGWWLEGSSSCSDDANCTVVHLAGEKQGFRCRCREGLVGDGFVNGTGCRRASHCSLSTLGSSKCAKALRIGLLLGVIIVGALVTAALSLVCYFTNRRSTWLTKQLTVRRLLREAAGNYIVPLYPYKEVERATNFFSEKHRLGTGAYGTVYAGNLHNNELVAIKKIRYRDTNSVDQVMNEIKLLSSVSHPNLVRLLGCCIEKGEHILVYEYMPNGTLSQHLQRERGGTLPWTIRLTIASETANAVAFLHSSNPPIYHRDIKSSNILLDFSFQSKVADFGLSRLGMTEISHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFGRPQSEINLAALAVEKIRKGRVDDIIDPFLDLNRDAWTLYSVNKVAELAFRCLAFHSESRPNMIEVAEELDHIRRSGWATMEETICLGSSVGSGCSSPRYNGNENLASKHEILVVPQKSNSFLHTIEEVKDSSPVSVHGTWSSRPSSPSTNSLLGNVVQ* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2139 699 Gene3D Phosphorylase Kinase; domain 1 318 414 - -
Psa4g2139 699 Gene3D Transferase(Phosphotransferase) domain 1 415 625 - -
Psa4g2139 699 ProSiteProfiles Protein kinase domain profile. 339 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2139 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Psa4g2139 699 MobiDBLite consensus disorder prediction 674 699 - -
Psa4g2139 699 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Psa4g2139 699 CDD STKc_IRAK 345 613 - -
Psa4g2139 699 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 651 IPR045274 GO:0007166
Psa4g2139 699 SMART serkin_6 339 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2139 699 MobiDBLite consensus disorder prediction 675 699 - -
Psa4g2139 699 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 21 651 - -
Psa4g2139 699 SUPERFAMILY Protein kinase-like (PK-like) 321 610 IPR011009 -
Psa4g2139 699 Pfam Protein kinase domain 340 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2139 Psa-Chr4 170252389 170256894 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2139 18 697 Receptor kinase-like Gene Family AT2G23450 53.362 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Psa4g2139 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2139 - - lja:Lj4g3v0867570.1 994.956