Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa4g2133 | ATGAATACTCTGAGCCAGCAAAACAAAAGAATGGAAGACGGAGAGGATGAAACCAATAGAGGTGATTCAACAATGTTGGAAAGTGATGTCATTGATCTGCCTTTGGCCAAAAGTAATGATGATCAACATTTGGTCAAAAACAATATAAGTGAAGATGGCGAGCAAGGCAAAAAGAAAAAGAAGAAGAAACTAAGTGAAGAAAGAAAGCATAATGAGTATAACCAGTTCAAAAGGGACGAATTTGAAGATGGTGATGATGGAACGGAAATGAAAAAGAAACGGATGCTAATTGAAGATGGAGAGCAGTGCAAGAAGTTAAAGAAAAAGAAAAAGAAACTGAGTGAAGAAAGCAAACAAAATGATTCTAAGGAGGTCGAAAGCAATGAATGTGAAGATGATGACCAAGGAAAGAAGATGAAAAAGAAGAATCTAATTGAAGGAAACACACTTAATGTACGTAATGACTTTAGCAGCAATGAAGGTGAAGATGGTGAGCAGGTCAAGAAGTTAAAGAAAAAGCAGAAGAATAGGAGTGAAGAAAGCAAACAAAAGGATTATAAGGAGGACAAAAGCAATGAATCTGATGACAAAGGAAAGAAGATGAAAAAGCAGCAGAAAGTAATTGAAGGAAACACACTTAATGAGCGTAATGACTTTAGCAGCAATGGAGGTGAAGATGGAGAGCAGGCCAAGAAGTTAAAGAAAAAGAAGAAGAAACTGAGTGAAGAAAGCGAACAAAAGGATTATAAGGAGGACAAAAGCAATGAATCTGAACATGATGACCAAGGAAAGAAGATGAAAAAGCAGCAGAAACTAATTGAAGGAAACACACTTAATGAGCGTAATGACTTTAGCAGCAATGAAGGTGAAGATGGAGAGCAGGCCAAGAAGTTAAAGAAACAGAAGAAGAAACTGAGTGAAGAAAGCGAACATGAGGATTATAACAAGGTCAAAAGCAATGAACGTGAAGATGATGACCATGAAAAGAAAGTGAAAAAGAAGAAGAAACTGATTGAGGGAGGCAGACTTGAGGAGTGTAATGACGTAATAAGCAATGGAGATGGTGACCAAGGAAAGACGACAAAGAAGAAGAATAAACCAAGTCACAAAAGAAAAAGTAAGAAGGACAATGATTTTAATAGCAATCAAGGTGAAGTTAATGATCAAGGCAAAACGATGAAGAAAAAAAGGGAAGCAAAGGCAGTTACAAATGATGAATCTCCTAACTCTGCACATAATGGAACATCTAAACGCAAACGGGTAACTTTTTCCAATCAAGTGGAGACGTTTTGTTGTGATGGTTTAGTGCGTGGGAAACGTTTTACACCCGAAGAAGATGAGAAAATTAAAGCCGCTGTTTATGACTATATAGATTCTCATTGTTTGGGAGATGAAGGTGTAGATATGATTCTTCATAGCCAATCCTACCCTTCAATTAGAGGTTGTTGGAAGGCTATTGCACAAGCCCTACCTCATAGGCCTCTGGATAGTGTGTCTAAACGCGGTCATGTTTTGTTTGAAAACAATGTGGAATTTGAGTGGACACCTGATGAGCGTGAATTTGTACGAAAGGCCTACGAGCAACATGGGCCTGATTGGAGGGCAATAGCTGATGCTTTGGGTAAAAGTCGAAATCAGGTAAAAGATTTGTGGCGCAGATTAAAGTGTACTGGGAGAAAGACAGGACCTTGGTCCCAGGAGGAGTATCAAACTTTATTTAATTTAGTAAACCTCGATCTCCGTACGAGGGCTTTAGAGCCTTATAGAAAATCCCAACATGGTATGTTGCGAGATAATATTTGTTGGGAAGCAATTAGTCAGAAGTTGAAAACCCGAGACAGTGCAATTTGCTGCATGAAGTGGTATGGACAGTTAATATCACCAATGACTGCTACTGGTGAATGGTTAGATTCTGATGACTTCCGCTTGATAGATGCTTTATATGCTTTGGATGCTTGCAGCATGGAAGAGGTAGACTGGGACAATCTAATTGAGTATAGGTCTGGTGATGTATGCAGACAACGATGGGATCATATGGTCCAACATATTGGCGATCGAGCAGGGAAGTCATTTATTGAGCAGGTTGAAATTCTTGCGAAGAGATTCTGTCCAGACTTATTGGAAGCAAGAGTGGCTTTTGACAACAAACCTGTGGTTTGTTGA | 2163 | 0.3897 | MNTLSQQNKRMEDGEDETNRGDSTMLESDVIDLPLAKSNDDQHLVKNNISEDGEQGKKKKKKKLSEERKHNEYNQFKRDEFEDGDDGTEMKKKRMLIEDGEQCKKLKKKKKKLSEESKQNDSKEVESNECEDDDQGKKMKKKNLIEGNTLNVRNDFSSNEGEDGEQVKKLKKKQKNRSEESKQKDYKEDKSNESDDKGKKMKKQQKVIEGNTLNERNDFSSNGGEDGEQAKKLKKKKKKLSEESEQKDYKEDKSNESEHDDQGKKMKKQQKLIEGNTLNERNDFSSNEGEDGEQAKKLKKQKKKLSEESEHEDYNKVKSNEREDDDHEKKVKKKKKLIEGGRLEECNDVISNGDGDQGKTTKKKNKPSHKRKSKKDNDFNSNQGEVNDQGKTMKKKREAKAVTNDESPNSAHNGTSKRKRVTFSNQVETFCCDGLVRGKRFTPEEDEKIKAAVYDYIDSHCLGDEGVDMILHSQSYPSIRGCWKAIAQALPHRPLDSVSKRGHVLFENNVEFEWTPDEREFVRKAYEQHGPDWRAIADALGKSRNQVKDLWRRLKCTGRKTGPWSQEEYQTLFNLVNLDLRTRALEPYRKSQHGMLRDNICWEAISQKLKTRDSAICCMKWYGQLISPMTATGEWLDSDDFRLIDALYALDACSMEEVDWDNLIEYRSGDVCRQRWDHMVQHIGDRAGKSFIEQVEILAKRFCPDLLEARVAFDNKPVVC* | 721 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa4g2133 | 720 | MobiDBLite | consensus disorder prediction | 1 | 419 | - | - | |
| Psa4g2133 | 720 | MobiDBLite | consensus disorder prediction | 404 | 419 | - | - | |
| Psa4g2133 | 720 | MobiDBLite | consensus disorder prediction | 9 | 23 | - | - | |
| Psa4g2133 | 720 | Pfam | Myb-like DNA-binding domain | 514 | 572 | - | - | |
| Psa4g2133 | 720 | MobiDBLite | consensus disorder prediction | 221 | 271 | - | - | |
| Psa4g2133 | 720 | MobiDBLite | consensus disorder prediction | 284 | 343 | - | - | |
| Psa4g2133 | 720 | MobiDBLite | consensus disorder prediction | 44 | 105 | - | - | |
| Psa4g2133 | 720 | Coils | Coil | 96 | 126 | - | - | |
| Psa4g2133 | 720 | PANTHER | GB|AAC33480.1 | 252 | 720 | - | - | |
| Psa4g2133 | 720 | Gene3D | - | 515 | 554 | - | - | |
| Psa4g2133 | 720 | Gene3D | - | 555 | 627 | - | - | |
| Psa4g2133 | 720 | SMART | sant | 560 | 627 | IPR001005 | - | |
| Psa4g2133 | 720 | SMART | sant | 510 | 557 | IPR001005 | - | |
| Psa4g2133 | 720 | SMART | sant | 437 | 508 | IPR001005 | - | |
| Psa4g2133 | 720 | MobiDBLite | consensus disorder prediction | 158 | 206 | - | - | |
| Psa4g2133 | 720 | MobiDBLite | consensus disorder prediction | 389 | 403 | - | - | |
| Psa4g2133 | 720 | ProSiteProfiles | Myb-like domain profile. | 514 | 555 | IPR001005 | - | |
| Psa4g2133 | 720 | ProSiteProfiles | Myb-like domain profile. | 627 | 680 | IPR001005 | - | |
| Psa4g2133 | 720 | Coils | Coil | 230 | 253 | - | - | |
| Psa4g2133 | 720 | SUPERFAMILY | Homeodomain-like | 513 | 572 | IPR009057 | - | |
| Psa4g2133 | 720 | CDD | SANT | 513 | 555 | IPR001005 | - | |
| Psa4g2133 | 720 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 514 | 559 | IPR017930 | - | |
| Psa4g2133 | 720 | ProSiteProfiles | Myb-like domain profile. | 556 | 625 | IPR001005 | - | |
| Psa4g2133 | 720 | MobiDBLite | consensus disorder prediction | 113 | 144 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Psa4g2133 | Psa-Chr4 | 169588086 | 169591224 | Dispersed |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | MYB-related | Psa4g2133 | Myb_DNA-bind_6 | 9.2e-12 | CL0123 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Psa4g2133 | - | - | mtr:MTR_8g077990 | 725.317 |