Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2132 ATGACAGGAAGACAAAATCCAACTTATGCTGCTGCAATTCAGCCAGCGACTCCAGTCTTTACATTTGTGTTGGCTATAATGATGGGTACAAAAAGAGTAAACTTGCTAAGATATGAAGGATCTTCGGAATTGGACATTATATCACACGGTGAAATAAGTTCCAGAGGTCAACCAGAGCCTTCTAGATGTCTGAAACATTTGCCGTTTTATATGCTGAAATTATTGCATCTGCACTTAATTATGGAATCATCACATGGAGCAAATTTGGATTATCTTCACTACCAAAGCCGGAAACCAATTATAAACCAAGCATTGTCACAGAAAACGAATGCAAGTCGTGACAGCAATGTGCTGAGTCAGAATACTCAAAAGCAAAACGACATGATTTCCAAAGGTTCTGGTTCAGATGCACAGGACAGTGCACCAGACAATAAACAAAGTACCCTTGTTTTTCCCAAGGGAAATTCCATTCCAAGTGCCAAGTGTCAGCATGTAGGCATTCTAGCTTTCACAATGTACCGTCGACGGAAGCAAAAGCTTGGTAGTGCCTTTGATATCACTGAAAGTCGTCTAAGTACCGATCAAACCAGAAGCCAGACATTCCTGATTGAAAGTAACGAAGATAACCAGTGGATTGACGCATTCTCCCGTGGGGGTAGTAGCATAGAGTTCAACTCAACTGCTGTTGGATCTTGCTCTATATCAAGGTATGGTAATGTATGGTGTGAGGCCATTTCCCCAGAGTCTGTCGAAATGCTCTTGAAATATGTTGGACAGGGGGAGTATACTCCTAGGCAAACTGTTATTCAGGAATCAGATGCTTGTGATGAACTGGCCTACTTAGCTAAGCAAATGCACTCCAATCCAAAACCTGATGATAGAAATGAATTTACAGATAATGTTACAGATTTACAACCGCCCGGTGATGCTCATATAAGTTTTTCTGGATCGAAGAAGCCCGCAGGAATTGAACAGTCTCAGACTGGAATTTCCCAAAGTCACGAAGGTGAATTATCCATTGAGGGAAGTTCAGGTATTCTGGAACCAAATGATATGTTCCAAAATATTGACTTGCTTATGTCTGAGCATAGTCGAACCTTCTTTACCGATGATAAATTTGACATTACTAATCAAAGAGAAGCTCAGACTGTGGCTGATGGCTTAGATCATTGTGAAACTCGTGATTCATCAGCACTTGTGACTGTGGCTGATGGCTTAGATCATTGTGAAACTCGTGATTCATCAGCACTTGTGGTGGAAACTAATATTACTGATTTATCTATTCAAAATACGGTGGATGAGAAGCAAAGCCCTCAACTAACTGAAAGTAATAATCAAAATTTGGAATCTTCTATGATGAAGGAAGAAGATGTTGTAGATACACAGACTCTGGATCAAAATGCAGTTGATGTTGATGGCCATCATCCTGATAGATCTATTTTTGCAATACCCCCGCAAGATTCTCTAGAAGGAGGAAGTGTAGTTAAAGAACTTGATGCCGAGTTAAGTAGTTTAGAGGATTCCATGGGAACGAGAACTGTTGCAGTTTCTGACATGCAGAAAGAAGAAAGGTGCAGTGAAGATATACGTTCCTGTGATTTGAGTCGGGCCAAAGCAAGTGAAAATTCAGTCTCGCTTAAAGATAAGGTGATGGATGATCAGTCTATATCAGATACACGTACATCGCCAATGGTTTCAGTTAAAGATGATCCTGTCTCTGTCGAGCAGGTAGTTGAGGTAGTTGAGGTAAGCAATTCCAGTTGTGAAGTTTGTCCTAATCTACAACAAACAGAACTCCAGCTCCTGTGCTCGTTGCTTGCACTAGAAGGAGCAGTTCGTGACTTGACTTCATCTGCTATGGATGAATTATGCATTTTCAGTGAAGCAATAAAGGCTCTTCTTACTACGTCTGCTAATGGTGCTTCGATTTTGAGGGTTTTGCAAGCCTTGAGTTCCTTTGTCACCTCATCGACTGAGAAAGAGAATGATGGAATTTCTCGGGCTCATTTGGAGTTTTCTGAAATCAATTCAGCTTAG 2037 0.4089 MTGRQNPTYAAAIQPATPVFTFVLAIMMGTKRVNLLRYEGSSELDIISHGEISSRGQPEPSRCLKHLPFYMLKLLHLHLIMESSHGANLDYLHYQSRKPIINQALSQKTNASRDSNVLSQNTQKQNDMISKGSGSDAQDSAPDNKQSTLVFPKGNSIPSAKCQHVGILAFTMYRRRKQKLGSAFDITESRLSTDQTRSQTFLIESNEDNQWIDAFSRGGSSIEFNSTAVGSCSISRYGNVWCEAISPESVEMLLKYVGQGEYTPRQTVIQESDACDELAYLAKQMHSNPKPDDRNEFTDNVTDLQPPGDAHISFSGSKKPAGIEQSQTGISQSHEGELSIEGSSGILEPNDMFQNIDLLMSEHSRTFFTDDKFDITNQREAQTVADGLDHCETRDSSALVTVADGLDHCETRDSSALVVETNITDLSIQNTVDEKQSPQLTESNNQNLESSMMKEEDVVDTQTLDQNAVDVDGHHPDRSIFAIPPQDSLEGGSVVKELDAELSSLEDSMGTRTVAVSDMQKEERCSEDIRSCDLSRAKASENSVSLKDKVMDDQSISDTRTSPMVSVKDDPVSVEQVVEVVEVSNSSCEVCPNLQQTELQLLCSLLALEGAVRDLTSSAMDELCIFSEAIKALLTTSANGASILRVLQALSSFVTSSTEKENDGISRAHLEFSEINSA* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2132 678 MobiDBLite consensus disorder prediction 107 145 - -
Psa4g2132 678 PANTHER HECT DOMAIN UBIQUITIN-PROTEIN LIGASE 610 678 - -
Psa4g2132 678 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UPL1-LIKE PROTEIN 610 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2132 Psa-Chr4 169482645 169485772 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2132 6 45 Nodulin-like Gene Family AT5G45370 65.000 6.57e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2132 - - gmx:100792961 369.007