Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2119 ATGCCCGGTGTCATTGCCCGTTTTGATGGCTCTGTTGTTCAGAATATGCTGCAGAAGTGGTTTGAAGAAGCCAATCCTCAATTTCGGAATCAAAAGCAAAAGAACCAAGATTCAGAATTTCGGAATCAAAAACAAAAGAACCAAGATTCAGAGGATTTTGAAAATTCTCAATCAAGTCAACGTTATTATTGTGCATTGGCTATTGGAGACGATGCTGTGATTTCAGCATATAGACTTTCTGAGGACAAAGGCAGGTCTTTAGTGGGAGCTATCTTGTCTAAAGTTGTACCAGCAACATTTTCCACTATAGCTTCATTTTCTAAATTGATTTGGCGGAGTGAAAATACTTCTCCACAGAAATCACCAAAGAAATCAGAGGTGAAACCTCAACCATTTGCTCGAGCTTCACCCCTGACATGTATAAAGGATCATCCTAGGAAAGGTGAAAAGCTTACCTTATCACCAAGTGGTACATTGGCTGCTATAACCGATTCACTCGGTCGCATATTGCTGCTAGATACTCAAGCACTTGTGGTGGTGCGCCTTTCGAAGAGATATAGGGATGCCAGCTGTTTATTCATGGAGATGTTGGTAAATAAAGATACAGCCTCATCAAGCTCCACTTATTATGAACCGATGAAGAGTGATTACTGCTTGTGTTTGGCTATTCATGCTCCCAGTCTGTTTATTCATGGAGATGTTGGTTTGGTGTTAGCAATGTCTAGTGCATTTGGCAACCGTATGCTGAAGCCATTTGTTGTAGCAGAACCTGAGATCCAGGAGCAGAAAATAGAGAAGAAACCGGAAGTTGCTGTGTCGCACACCGAATGGCACCAGTTTGGTCCTCATGCTCAAACCGTTTTGTTGTCGCAGCAACCAAACTACAATCTCACATTTATTTCACTGCCGCCATTGCCATTCATCTTTATCACTGTAGCACATCTCCTCACCAAATTACCTAACCATGACCTGCAAGAAACACACCAAACCATAACAGTCAATTTAGAACCTTCTGGTTTACAGACTTGA 1029 0.4179 MPGVIARFDGSVVQNMLQKWFEEANPQFRNQKQKNQDSEFRNQKQKNQDSEDFENSQSSQRYYCALAIGDDAVISAYRLSEDKGRSLVGAILSKVVPATFSTIASFSKLIWRSENTSPQKSPKKSEVKPQPFARASPLTCIKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLSKRYRDASCLFMEMLVNKDTASSSSTYYEPMKSDYCLCLAIHAPSLFIHGDVGLVLAMSSAFGNRMLKPFVVAEPEIQEQKIEKKPEVAVSHTEWHQFGPHAQTVLLSQQPNYNLTFISLPPLPFIFITVAHLLTKLPNHDLQETHQTITVNLEPSGLQT* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2119 342 Pfam Rab3 GTPase-activating protein regulatory subunit N-terminus 54 226 IPR032839 -
Psa4g2119 342 MobiDBLite consensus disorder prediction 26 56 - -
Psa4g2119 342 PANTHER RAB3-GAP REGULATORY DOMAIN 1 226 IPR026059 GO:0043087
Psa4g2119 342 MobiDBLite consensus disorder prediction 34 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2119 Psa-Chr4 168035869 168037389 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2119 234 291 PP2C-type Phosphatase Gene Family AT5G53140 55.000 1.81e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2119 K19937 - gmx:100786900 335.88