Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2117 ATGTCGTGCCCGGCGTCCATGCTTTCAGTACCTCATAGATTGCTTCGGAAAGGAAATTGGTTCGTACAAGAGAAAAGTTGTAAGATCCTTGCTTTAATAGTCAGTGTCAGGCCAAAAAATCAGAGTGGCAATGCTTCAAAGGGAGAAGCATCAAATGAAAAGAAATCAATTACCTCTATTGATGATGTTTTGATAGGATTGGTAAAATGGCTTTGTGAGCAGCTGAAGAAACCTTCTCATCCTACTCGTGGAGTTCCAACAGCTATCAATTGCTTATCAAGTCTACTTAAGGAACCTGTTGTTAGGTCTTCCTTTGTTCAAGCCGATGGGGTCAAGTTGCTTGTGCCATTGATTTGTCCAGCATCCACTCAACAATCTATTCAGCTTCTTTATGAAACATGTCTCTGCATATGGCTCTTATCATATTATGATCCTGCAATTGAATATTTGGCTACTTCAAGGACCCTTCCAAGACTTATTGAGGTTGTTAAGAGTTCTACAAAAGAAAAGGTTGTTAGAGTTGTTGTCTTGACACTCAAAAACTTGTTGTCGAAAGGGACATTGGGTGCTCAGATGGTTGATCTTCAGCTTCCACAGGTTGTTCAAAGTTTGAAAGCACAAGCGTGGAGTGATGAGGACTTGTTGGAGGCACTGAATTCCCTTGAAGAAGGGCTTAAGGATAACATCAAGAAGCTTAGTTCTTTTGATAAGTACAAGCAAGAAGTTCTCCTTGGCAATCTAGACTGGTCTCCCATGCACAAAGATCCCTTATTTTGGCGAGAAAATATAACCAATTTTGAAGATCATGATTTCCAGATTCTAAGGGTCCTATTAACAATTTTGGATTCGTCCAATGATCCAAGGACTCTAGCTGTTGCTTGCTTTGACATTTCACAGTTCATCCAATGCCATCCGGCTGGGCGGATCATTGTGACAGACCTTAAAGCCAAGGAACGAGTGATGAAACTAATGAATCATGAGAGTGCTGAGGTTACCAAAAATGCACTTCTCTGCATCCAAAGGCTTTTCTTGGGTGCAAAGTATGCAAGCTTCTTGCAGGTCTAG 1065 0.4113 MSCPASMLSVPHRLLRKGNWFVQEKSCKILALIVSVRPKNQSGNASKGEASNEKKSITSIDDVLIGLVKWLCEQLKKPSHPTRGVPTAINCLSSLLKEPVVRSSFVQADGVKLLVPLICPASTQQSIQLLYETCLCIWLLSYYDPAIEYLATSRTLPRLIEVVKSSTKEKVVRVVVLTLKNLLSKGTLGAQMVDLQLPQVVQSLKAQAWSDEDLLEALNSLEEGLKDNIKKLSSFDKYKQEVLLGNLDWSPMHKDPLFWRENITNFEDHDFQILRVLLTILDSSNDPRTLAVACFDISQFIQCHPAGRIIVTDLKAKERVMKLMNHESAEVTKNALLCIQRLFLGAKYASFLQV* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2117 354 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 12 353 - -
Psa4g2117 354 SMART arm_5 97 142 IPR000225 GO:0005515
Psa4g2117 354 SMART arm_5 304 344 IPR000225 GO:0005515
Psa4g2117 354 SMART arm_5 143 184 IPR000225 GO:0005515
Psa4g2117 354 Pfam V-ATPase subunit H 14 225 IPR004908 GO:0000221|GO:0046961|GO:1902600
Psa4g2117 354 Gene3D - 245 346 IPR038497 -
Psa4g2117 354 Pfam V-ATPase subunit H 231 343 IPR011987 GO:0000221|GO:1902600
Psa4g2117 354 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 12 353 IPR004908 GO:0000221|GO:0046961|GO:1902600
Psa4g2117 354 SUPERFAMILY ARM repeat 17 344 IPR016024 -
Psa4g2117 354 Gene3D - 3 233 IPR011989 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2117 13 353 Primary Pumps ATPases(2) AT3G42050 80.352 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2117 K02144 - gmx:100788723 593.193