Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2067 ATGAAGAACAGAGCTTTGAAGTTCAAATCAACTCTAGAAAGATTAGAAAAAACTCTCCAATCATTAGCACCGTTGATCAATCAAATAGATGAACTCAACAAGAAACTAGATCGACCAGCTAAAGAAACAGAAAGACTAATCAAGCAAATGAAAGACGGAAAAGAACTCGTCCTCAAATGTTGTGATCAAGACAAAATCCAGTGGTGGAACTGTTGTTACAAAAAGGCAGAATATCAAGAACAGCTTGAAGAGTTGGATGGTGAGATTAGAAGATTTTTTGAGCTTGATTTGAGAGCTCAAGATGCGAGGAATGGGTTGGAAGCACTTTTGGAGATTAAGGAGTTTCGTGCTGAGTTTAGAAGTGTTGGTTTGAGGAATGAGAGAATTGAATTAAGAGGTGTTTGTTTGCCTCCTCAACCACCTGGTTTTACTGTTGGGTTGGATGGGCCTTTGAATGAGTTGAAGAAGAGGTTGTTGAATGATGAGGTTAGTGTTTCTGTTGTTACGGTTACTGGTTCCGGTGGATCGGGGAAATCTACGTTGGCGAAAAGGTTTTGTTGGGATGAACAAGTAAAAGGTAAATTCAAGGATAATATCTTGTTCATTACATTTGCAAAAACACCAAAGCTGAATGCCATAGTGCAGAAACTGTTTCAACACACTGGCTATCAAGTTCCCGATTTTCAAAGCGATGAAGATATGTTTAACCAATTGGAACAATTGATGAAACAAATTGTGAAAAATGGCCCGATATTGTTGGTCTTGGACGATGTTTGGTTAGGATCGGAATCACTTGTTGACAATTTTGTGTTTGAGATTCCAAATTACAAGATTTTAGTGACATCAAGATTTGCAATTGGAAGATTTGGACATCCATTTGTCTTGAAACCACTTTCGGAAGCAAATGCTATAAACCTGTTTAAACATTCAGCTTCCTTAACCAAGAGCAACTCAGATATTCCTGATGATGTTGTGAAAGAGATAGTAAGAGGTTGTAGCGGTTCTCCCTTAGCGCTTCGAGTGAGTGGAAGATCGTTAAGTAATGAACCACAGATAGTTTGGCTTAACAGGGCTAGGGAATTATCAGCTGGTGGTACGATTCTCGATTCTAACACCGACATACTTTCGTGTCTCCAAAAGAGCTTAGATGTTTTGGATCCAAAATCCATGGAGTGTTTTCGGGACTTAGGCTTATTCCCTGAAGATCAGAGGATCCCTGTCGCTGCCCTTGTTGATATGTGGGCAGAACTAAGGAATGATGATGATGCAACTGCAATGGAGAGAATCTATAAACTGGTTAACCTCAACTTAGCTGATATTATTGTCACAAGGAAAGTGGCGAGTGGTACAATTGACTACAACTATCATTATGTTACACAACACGGCCTTCTTCGTGACCTAGCCATCCGTAATAATAGCCAAGAGCCCGAGGATAAGAGGAATAGACTCATAATTGACACAAGTGCAAATAATCTTCCCTCGTGGTGGACATCAGAGACTGAATATCACATTGCAGCTCACGTTTTATCTATATCAACTGATGAGGCATTCCCTTCGAAATGGTGTAACTTGCAACCAACTCAAGTTGAGGCTTTCGTGTTAAACCTTAGAGAAAAGAAGTGCATACTACCAATGTTCATGAAGAAAATGAACAAACTAAAAGTTTTAATAATAACAAACTATGACTTCTATCAAGCTGAATTAGAGAATTTCGAGCTTCTCGACCATCTATCAAGTCTCAAGCGAATCAGATTAGAGAAAGTCTTGATTCCTTTCCTCGGGAAAACAATAGTACAATTGAAGAATCTTCAGAAGTGTTCTTTCTTCATGTGCAATGTGAATGAAGCATTTAAGAATTGCACTATCCAAGATTCAGAAATTTTTCCAAATTTGGTGGAGATCAATTTCGATTACTGTGACATGGTGGAACTGCCAAATGTGATTTCTTACATTGTATCCCTAAAGAAGGTTAGTATTACAAATTGTCATAAGCTTAGTGCACTTCATGAAGGAATTGGAAAATTGGTTAATTTGGAATCACTAAGGTTAAGTTCATGCAGTGGTTTATTAAAGTTGCCAGATTCAATCACAAATATTCATAGGCTAAAGTTTCTAGACATCTCTGGATGCATAAGCCTTAGTCATTTACCTGATAATGTAGGTGAGTTGGAGAAACTAGAAAATCTGAATATGAGAGGTTGCTCAAGCATTAGTGAATTGCCATCATCAGTTATGGATCTTGAGGGATTAAAGCATGTGGTGTGTGATGAAGAAACTGCTGAAAAATGGGAACCTTTTAGAGCCATTCTTAGTGATCTAAGGATAGAGGTTGTTCAAGAAGATTTCAATTTAGATTTTCTTTACAATCAGTAG 2373 0.3805 MKNRALKFKSTLERLEKTLQSLAPLINQIDELNKKLDRPAKETERLIKQMKDGKELVLKCCDQDKIQWWNCCYKKAEYQEQLEELDGEIRRFFELDLRAQDARNGLEALLEIKEFRAEFRSVGLRNERIELRGVCLPPQPPGFTVGLDGPLNELKKRLLNDEVSVSVVTVTGSGGSGKSTLAKRFCWDEQVKGKFKDNILFITFAKTPKLNAIVQKLFQHTGYQVPDFQSDEDMFNQLEQLMKQIVKNGPILLVLDDVWLGSESLVDNFVFEIPNYKILVTSRFAIGRFGHPFVLKPLSEANAINLFKHSASLTKSNSDIPDDVVKEIVRGCSGSPLALRVSGRSLSNEPQIVWLNRARELSAGGTILDSNTDILSCLQKSLDVLDPKSMECFRDLGLFPEDQRIPVAALVDMWAELRNDDDATAMERIYKLVNLNLADIIVTRKVASGTIDYNYHYVTQHGLLRDLAIRNNSQEPEDKRNRLIIDTSANNLPSWWTSETEYHIAAHVLSISTDEAFPSKWCNLQPTQVEAFVLNLREKKCILPMFMKKMNKLKVLIITNYDFYQAELENFELLDHLSSLKRIRLEKVLIPFLGKTIVQLKNLQKCSFFMCNVNEAFKNCTIQDSEIFPNLVEINFDYCDMVELPNVISYIVSLKKVSITNCHKLSALHEGIGKLVNLESLRLSSCSGLLKLPDSITNIHRLKFLDISGCISLSHLPDNVGELEKLENLNMRGCSSISELPSSVMDLEGLKHVVCDEETAEKWEPFRAILSDLRIEVVQEDFNLDFLYNQ* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2067 790 Gene3D - 128 287 IPR027417 -
Psa4g2067 790 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 396 IPR027417 -
Psa4g2067 790 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 789 IPR039203 GO:0050832
Psa4g2067 790 Gene3D - 382 471 IPR036388 -
Psa4g2067 790 Coils Coil 75 95 - -
Psa4g2067 790 Gene3D - 297 381 IPR042197 -
Psa4g2067 790 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 2 118 IPR008808 -
Psa4g2067 790 PRINTS Disease resistance protein signature 167 182 - -
Psa4g2067 790 PRINTS Disease resistance protein signature 245 259 - -
Psa4g2067 790 PRINTS Disease resistance protein signature 332 346 - -
Psa4g2067 790 PRINTS Disease resistance protein signature 697 713 - -
Psa4g2067 790 ProSiteProfiles RPW8 domain profile. 1 131 IPR008808 -
Psa4g2067 790 Gene3D Ribonuclease Inhibitor 488 772 IPR032675 -
Psa4g2067 790 Pfam NB-ARC domain 150 351 IPR002182 GO:0043531
Psa4g2067 790 SUPERFAMILY RNI-like 540 753 - -
Psa4g2067 790 PANTHER LRR AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2067 Psa-Chr4 158766431 158769513 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2067 631 750 WRKY Transcription Factor Family AT4G12020 31.206 3.09e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2067 - - mtr:MTR_8g479450 1186.02