Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2064 ATGAGTAGCGCTACACATATTCTTTCCCTTACAACAAGATTTCATGATATCTTGATTAAGATATCACAAATTGTTGAAAAAGCTAGAAACAACAAACGTACAAGAACATTGTTGAGATCAACTTTAAAGGATTTAACTCCTCTTGTTAAAGACATTAACCAATACAATCAACACTTGAATCAACCTAGAGCTGAAATTAACTCTCTCTTACAAGAAAATGTTGCATGCAAATGCTCTTCTCACAATACCTTGTGGAACAAGTGTCTCTCATTGTTCAGGAATGGTTCTTATGTTGTTGACGAAGATTCACAATCTCTTACCGTAAAGGATGTTAAAGAGACGCTTTATAAAGTCAGAGAGATTCTTGAGCTTATCAACAATGAAAATTTTGAACACAAACTTAATGAAGATGGAGAACCACCAATTAAGAGTCCTTTTGGTATTCCTGAAAATCCAGAAATTCACTGTTGGTTGGATATACCGTTTACGAAGCTGAAAATGAGCTTCTTAAGGATGATTGGACTTCTGCTGAAGAAAGTTGAGGGAAGTCCACTTTTGTTGGTTCTGGATGATGTTTGGCCTAACTCAGAAACCTATATTCAGAAACTTCAATTCCAGATATCAGATTTCAAAATTCTGGTCACTTCAAGAGTTGCATTTGCAAAATTAAGCACAACAAGTGTCTTAAAACCTCTAGTTCACAAAGATGCAGTAACACTTTTCCATCACTTTGCTCAGATGGAAAAAGATAATTCAAATGTTCTCGACAAAGATCTCGTCGAAAAGGTTGTGAAAAATTGCAAAGGTTTACCGATTGCCATCAAAGTGACTGCAACATCACTGAGAAATCGGCCCTATGACTTTTGGCGAAAGACGGTGAAGGAACTATCACAAGGTCATTCTATACTTGATTCTAACACTGAATTAATTACTGATATCCTCCAAAAGGTATTAGATGTTTTGGAAGATAATCTCATACTCAAAGAGTGTTTCAAGGACCTAGCTTTATTTCCCGAAGACCATAGAATTCCTGTTGTTGCTCTTATGTATATGTGGACAGAGTTGTATGATCTAGATGACAATGGAATAGAAGCAACGGAAATCATCAGCAAATTAAGCTCCATGAATCTGGCTCATGTCTCAATAGCAAGGAAAAATGCAAGTGACGCAGACGATTACAACTACAATAGCCATTTCATCACCCTTCAGGATCTTGTAAGAGATCTTGGAATTTACCAAAATACCAAAGAACCAATTGTGCGGAGAAAAAGAATGATCATTGACATGAATGTAAATAAATGGGAGTGGCATATTGGTCAGAAGCAGCAAGACCTGATGATCCGTATATTATCAAAATTTCTTAGTTTGTGCGTAAAACAAAATCCCCAACAGCTCGATGCCCGTATATTATCTGTATCAACTGATGACACTTGTGCATCGGATTGGTCTCAAATTGAAACAGCACAGGCTGAGGTTCTTATTTTAAATCTCCATACGAAGCAGTACTTATTTCCGGAGTCAATGGAGAAAATGAGTAAGCTAAAAGTTCTGATAATCACAAACTACGGTTTCCATCCTTGTGAACTGAACAACTTTGAGCTACTCAACTCTTTACACAGCCTGACAAGAATCAGACTAGAGTGGATTTCTGTTCCTTCCTTCGGAACATTGAAGAATCTGAAAAAACTATCGCTCTACATGTGTCATACGAATCTCGCTTTTGAGAAGGGTAGCATGGTGATTTCAGATGCATTTCCTAATCTAGAAGAGTTGAACATAGATTACTGCAAAGATTTGGTGGTATTGCCTAATGCAGGTAGCATGGTGATTTCAGATGCATTTCCTAATCTAGAAGAGTTGAACATAGATTACTGCAAAGATTTGGTGGTATTGCCTAATGCAGTATGTGATATCACCCCATTAAAGAAACTCAGTGTTACTAATTGCCACAAACTTTCTTCACTTCCTCAAGATATTGGAAAATTGGAGAATTTAGAACTTCTAAGGCTGAGTTCCTGCACTGATTTAGAAGAGATACCGAATTCCATTGGAAAGCTTTCAAATCTAAGGCATCTTGACATCTCAAACTGCATAAGTCTTTCAAATTTACCGGAGGAATTTGGTGATATTTGCAATCTAAGGAATCTGTACATGGCAAGTTGTGGAAGTTGTGAGTTGCCATTCTCAGTCATCAATCTTTTGAATTTGAAGGTGATAACGTGCGATGAAGAGACGGCTGCTTCATGGGAAGCTTTCCAAGCTATGCTTCCCAATATGAAGATAGAGGTTCCTCATGTTGATGTTAACTTAAACTGGCTTCATTCAATTATCTCCTAA 2337 0.3714 MSSATHILSLTTRFHDILIKISQIVEKARNNKRTRTLLRSTLKDLTPLVKDINQYNQHLNQPRAEINSLLQENVACKCSSHNTLWNKCLSLFRNGSYVVDEDSQSLTVKDVKETLYKVREILELINNENFEHKLNEDGEPPIKSPFGIPENPEIHCWLDIPFTKLKMSFLRMIGLLLKKVEGSPLLLVLDDVWPNSETYIQKLQFQISDFKILVTSRVAFAKLSTTSVLKPLVHKDAVTLFHHFAQMEKDNSNVLDKDLVEKVVKNCKGLPIAIKVTATSLRNRPYDFWRKTVKELSQGHSILDSNTELITDILQKVLDVLEDNLILKECFKDLALFPEDHRIPVVALMYMWTELYDLDDNGIEATEIISKLSSMNLAHVSIARKNASDADDYNYNSHFITLQDLVRDLGIYQNTKEPIVRRKRMIIDMNVNKWEWHIGQKQQDLMIRILSKFLSLCVKQNPQQLDARILSVSTDDTCASDWSQIETAQAEVLILNLHTKQYLFPESMEKMSKLKVLIITNYGFHPCELNNFELLNSLHSLTRIRLEWISVPSFGTLKNLKKLSLYMCHTNLAFEKGSMVISDAFPNLEELNIDYCKDLVVLPNAGSMVISDAFPNLEELNIDYCKDLVVLPNAVCDITPLKKLSVTNCHKLSSLPQDIGKLENLELLRLSSCTDLEEIPNSIGKLSNLRHLDISNCISLSNLPEEFGDICNLRNLYMASCGSCELPFSVINLLNLKVITCDEETAASWEAFQAMLPNMKIEVPHVDVNLNWLHSIIS* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2064 778 SUPERFAMILY RNI-like 500 741 - -
Psa4g2064 778 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 611 764 IPR039203 GO:0050832
Psa4g2064 778 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 123 605 IPR039203 GO:0050832
Psa4g2064 778 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 10 171 IPR039203 GO:0050832
Psa4g2064 778 Gene3D Ribonuclease Inhibitor 489 663 IPR032675 -
Psa4g2064 778 Pfam NB-ARC domain 184 315 IPR002182 GO:0043531
Psa4g2064 778 Gene3D - 232 314 IPR042197 -
Psa4g2064 778 Gene3D Ribonuclease Inhibitor 672 744 IPR032675 -
Psa4g2064 778 PRINTS Disease resistance protein signature 179 193 - -
Psa4g2064 778 PRINTS Disease resistance protein signature 267 281 - -
Psa4g2064 778 PRINTS Disease resistance protein signature 684 700 - -
Psa4g2064 778 Gene3D - 315 411 IPR036388 -
Psa4g2064 778 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 334 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2064 Psa-Chr4 158526209 158530776 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2064 550 740 Receptor kinase-like Gene Family AT5G49660 27.551 8.90e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2064 - - mtr:MTR_8g079280 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3741 2 398391038 398394373 Psa4g2064 4 158526209 158530776 PCT