Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2051 ATGGGTCTCTGCACTTCAAAACCACTCTCTTCTCCCAATTCTGAAACTAACATTGAAATTCAGTTACAACAAGAAACCACTTCAACTAATACCAATTCAGAAATCCAAAACCCTAAAAAATCACCGTTTTTCCCTTTTTACTCTCCGAGTCCAGCGCACCATTTATTCTCCGGCAAGTTTCCGAAAACTCCGGCGACTCCGAGAACTCCGAGGAGATTCTTCAGACCAGCGTCGCCGGCGAAGCACATTAGGTCGCTTCTAGCTCGACGACATGGCTCCGTTAAGCCGAATGGTGCTAGCGTGTCGACGGGGAGTGAAGGTGAAGGTGAAGGTGTTGCTCGTCTTGATAAGAATTTCGGATTTTTGAAGAATTTTGGGAGTAAGTATCAGCTTGGTGAAGAAGTTGGTAGAGGTCACTTTGGTTATACTTGTTCTGCTGTTGTGAAGGGTAATAATAAGGGTGATGTTAAGGGTCATCGTGTTGCTGTTAAGGTTATTCAAAAAGTTAAGATGACTACTGCTATTGCTATTGAGGATGTGAGAAGGGAAGTGAAAATTTTGAGAGCTTTGAATGGACATAAGAATTTAATTAAATTTTATGATGCTTATGAAGATCATGATAATGTGTATATAGTTATGGAGTTGTGCGAAGGGGGCGAGCTTTTGGATAGAATACTATCGAGAGGAGGGAAATACTCCGAGGAAGATGCAAAAGCTGTCATGACACAAATACTGAATATTGTTGCATTTTGCCATCTACAGGGTGTTGTTCATCGTGATCTTAAACCTGAGAACTTCTTGTTTTCAACCAAAGATGAGAACTCAGAGCTGAAGGCCATAGACTTTGGTTTGTCAGATTTTGTCAAACCGGATGAACGACTTAATGATATCGTTGGTAGTGCATACTATGTTGCTCCCGAGGTTCTGCATAGAGCTTACAGTACAGAAGCTGATGTCTGGAGTATTGGCGTGATTGCTTATATTTTATTATGTGGAAGTCGTCCATTTTGGGCACGGACTGAATCTGGGATATTTCGCTCTGTATTGAAAGCTGATCCAAGTTTTGATGAACCTCCTTGGCCTTCTTTGTCAGACGACGCAAAAGATTTTGTTAAGCGATTACTAAATAAAGATCCAAGGAAGAGAATGACTGCAGCGCAGGCATTAGGTCACCCATGGATTAAAAGTTATAAGGATGTGAAAATACCCCTGGATATTCTAGTGTTCAAGCTCATGAAGGCATACATGCGTTCATCGTCTCTACGAAAAGCAGCTTTAAGGGCTCTCTCTAAGACGTTAGCTGCTGATGAGCTGAACTATTTGAAGGAGCAGTTTTCACTTTTAGAACCAAACAAAAATGGCACAATTAGCTTGGAAAATATCAAAGTGGCCTTGATGAAGAATGCGACGGATGCTATGAAGGAGTCACGCATTCCTGATCTTCTGGCTTCTGTAACGTTTAATGCTTTGCAATTTAGAAGGATGGATTTTGACGAGTTCTGTGCAGCTGCACTTAGTGTTCATCAACTTGAAGCACTTGATCGGTGGGACCAACATGCCCGCTGTGCCTATGAAATTTTTGAAAAGAATGGAAACAGGGCTATAATGATTGAGGAACTAGCTTCGGAGCTTGGCCTCGGTCCAACTGTACCTGTTCATGCTGTTCTTCATGACTGGATTAGACACACAGATGGAAAGTTAAGTTTCCTCGGGTTCGTTAAGCTGCTGCATGGTCCATCTCGAAGTCTTGTAAAACCGCAATAA 1764 0.4201 MGLCTSKPLSSPNSETNIEIQLQQETTSTNTNSEIQNPKKSPFFPFYSPSPAHHLFSGKFPKTPATPRTPRRFFRPASPAKHIRSLLARRHGSVKPNGASVSTGSEGEGEGVARLDKNFGFLKNFGSKYQLGEEVGRGHFGYTCSAVVKGNNKGDVKGHRVAVKVIQKVKMTTAIAIEDVRREVKILRALNGHKNLIKFYDAYEDHDNVYIVMELCEGGELLDRILSRGGKYSEEDAKAVMTQILNIVAFCHLQGVVHRDLKPENFLFSTKDENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRSVLKADPSFDEPPWPSLSDDAKDFVKRLLNKDPRKRMTAAQALGHPWIKSYKDVKIPLDILVFKLMKAYMRSSSLRKAALRALSKTLAADELNYLKEQFSLLEPNKNGTISLENIKVALMKNATDAMKESRIPDLLASVTFNALQFRRMDFDEFCAAALSVHQLEALDRWDQHARCAYEIFEKNGNRAIMIEELASELGLGPTVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLVKPQ* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2051 587 SUPERFAMILY EF-hand 422 578 IPR011992 -
Psa4g2051 587 ProSiteProfiles EF-hand calcium-binding domain profile. 436 471 IPR002048 GO:0005509
Psa4g2051 587 CDD STKc_CAMK 128 393 - -
Psa4g2051 587 PANTHER SERINE/THREONINE-PROTEIN KINASE 32 582 - -
Psa4g2051 587 SUPERFAMILY Protein kinase-like (PK-like) 126 422 IPR011009 -
Psa4g2051 587 Gene3D Phosphorylase Kinase; domain 1 122 220 - -
Psa4g2051 587 Gene3D Transferase(Phosphotransferase) domain 1 221 405 - -
Psa4g2051 587 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 32 582 - -
Psa4g2051 587 Gene3D - 412 575 - -
Psa4g2051 587 SMART serkin_6 129 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2051 587 ProSiteProfiles Protein kinase domain profile. 129 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2051 587 ProSitePatterns Protein kinases ATP-binding region signature. 135 164 IPR017441 GO:0005524
Psa4g2051 587 Pfam Protein kinase domain 129 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2051 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Psa4g2051 587 Gene3D - 434 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2051 Psa-Chr4 157868096 157872558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2051 1 585 EF-hand Containing Proteins AT3G50530 71.362 0.0 907
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Psa4g2051 Pkinase 4.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2051 K00924 - gmx:100803313 912.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2051 4 157868096 157872558 Psa2g3754 2 399291011 399295390 PCT