Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2022 ATGGATTGGGTACGAGGAGAATCACTTGGTAGAGGAAGTTTTGCAACTGTCTCATTTACTCATACCCAAACCGTCAAAACATCCGAGGTTTCAACCTCGTATTCCCTCAAAAACGAGAGACAGGTTCTCGATCGTTTAGGTTCTTGTCAACAAATCATTCGCTGTTTCGGAGATGATTACACCTTTGAGAATGGTCACGAGTATTACAATCTGTTTCTCGAATACGCTTCTGCCGGTACTCTCGCCGATCAAGTTAAATTCCACGGTGGCCGGATTCCTGAACAAAACATCCGCGGTTACACGAAGTCAATCGTGGAGGGTCTTAACCATATTCATAGCAAAGGATTCGTTCATTGTGACATCAAGCTTCAAAACATTCTAGTATTCCACGATGGTGAAATTAAAGTAGCTGATTTCGGTCTTGCGAAAAAATCAGGGGAGGAACAGAGTAGGTTCGAATGCAGGGGGACTCCACTTTTTATGTCGCCGGAATCAGTTAACAGCGGGGAGTATGAGTCGCCGGCGGATATTTGGTCGCTTGGCTGTGCGGTGGTGGAGATGGTAACAGGAAAACCGGCGTGGAAATTGGAGAAAGATTCATCTATGTGGTCGTTGTTGCTTAAAATTGGTGCCGGAGAAGAATCGCCGATGATACCCGAAGATTTATCAAAAGAAGGAAAAGATTTTGTTGAGAAATGTTTTGTTAAAGATCCAAGAAAAAGATGGACGGCTGAGATGCTTTTGAGTCATCCTTTTATCGAAGAAGTGAAGAATGCTAATGAACCATCACCAAGAAATCATTTTGATTTCAATGATTGGGTTTCGAGTGTTAGTCATTCAGCTCCAAGCACGCCGGAATCTGAAGAGTCGCGTCAATGGAATTTTGATTCTTGTTCTTTTTCGCGTGTAGATCGACTCCAGCAGCTTGTGACGGTTGAAGTGCCAGCGTGTTGGTCGGAATCAGATAGTTGGATTAGTGTTAGGTGA 987 0.4377 MDWVRGESLGRGSFATVSFTHTQTVKTSEVSTSYSLKNERQVLDRLGSCQQIIRCFGDDYTFENGHEYYNLFLEYASAGTLADQVKFHGGRIPEQNIRGYTKSIVEGLNHIHSKGFVHCDIKLQNILVFHDGEIKVADFGLAKKSGEEQSRFECRGTPLFMSPESVNSGEYESPADIWSLGCAVVEMVTGKPAWKLEKDSSMWSLLLKIGAGEESPMIPEDLSKEGKDFVEKCFVKDPRKRWTAEMLLSHPFIEEVKNANEPSPRNHFDFNDWVSSVSHSAPSTPESEESRQWNFDSCSFSRVDRLQQLVTVEVPACWSESDSWISVR* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2022 328 CDD STKc_MAPKKK 2 253 - -
Psa4g2022 328 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 307 - -
Psa4g2022 328 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 307 - -
Psa4g2022 328 SUPERFAMILY Protein kinase-like (PK-like) 3 289 IPR011009 -
Psa4g2022 328 ProSiteProfiles Protein kinase domain profile. 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2022 328 SMART serkin_6 3 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2022 328 Gene3D Transferase(Phosphotransferase) domain 1 2 311 - -
Psa4g2022 328 Pfam Protein kinase domain 5 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g2022 328 ProSitePatterns Serine/Threonine protein kinases active-site signature. 116 128 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2022 Psa-Chr4 153242753 153243774 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2022 1 328 MAP Kinase Kinase Kinase AT4G36950 51.585 4.92e-116 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Psa4g2022 Pkinase 6.2e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2022 - - aprc:113858661 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g2022 4 153242753 153243774 Psa4g2022 4 153242753 153243774 ECH