Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2013 ATGGGTTCCGTAAAAGTAATATCCACAACAACAATCCAAGCACCGAGTCATAACAATGGCATCTCAACTCAGATAATCGAATTAACACCATGGGATCTTCAGTTCCTCCAACTTGAAACCATCCAAAAAGGTCTTCTTTTTCAACAACCCACACTCACTTCCAACCAAATCAATCATTTGAAACAAACTCTTTCAACCACACTCTCCTTCTTTCCGCCCTTAACAGGCCGTCTCATAATCACACAACACAACAACAACAACGCTTCATGTTCCATCATTTGCAACAACGTTGGTGCTCTCTTCGTTCATGCCAAAGCAGAAACCACAACCGTTTCCGACATCCTTCAACCCAACTACATACCTTCCATTGTTCACTCCTTTTTCCCACTTAACGGCGTCAGAAACCACGAATCCACGTCACAGCCAATTCTAGCGGTCCAAGTAACTGAGTTAAGTAACGGAATCTTCATCGCCTTCACTATCAACCATGTTGTTTCCGACGGCAAGTCGTTTTGGCATTTCGTCAACTCTTGGGCACAAATCTCAAAAGGTTCTCAACAAATCACCAAACTACCTTCACTTCAACGCTGGTTTCCAAACGACGTTCAACTTCCAATACGCTTCCCTTTCACTATAACGGAATCACAAAACAAAAGCACTTCCAAAAAGTTGCCGGAAAGAATCTTTCATTTCACCAAGGAGAAAATCTTAGAACTGAAATCTAAAGCGAACTCAGAAGCCAAAACCCAAACTGAGTTAGTCACTGAAATATCTTCGCTTCAAGCGCTACTATCTCACATTTGGCGTCGCGTTATTCGTTGCAAACAACCAGGTCCACAAGAAGATTTTCGCTATATGTTAATTATAGGTGCTAGACCTAGGATGATTCCGCCACTTGACGAGGATTATTTTGGAAATGCAGCTGTGATTGGTGGTGTGTATATGAAAGCTGAGGAGATTCTAGAGAGTGGAATTGGAAAAGTTGGTTTGGAGATGAACAAGATGATTATGTTACATTCTGATGAGAAAATAAGGAAGCATTATGAGTGTTGGTTGAGAGTGCCGAGGTTGTTAGAGATTAGTGGTTTGGCAAACGGTAATTCATTGGCAACAAGTAGTTCTCCAAGGTTTGATGTTTATGGTAATGATTTTGGTTGGGGGAAGCCTGTGGCGGTTAGAAGTGGGGGTGCGAATAAGAATAATGGGAAGATTACTGTGTATGCTGGAGCCGAAGAAGGTAGTATTGATATTGAAGTTTGTCTTTCTTATGAGATTTTGGAAGCTTTGGGAAATGACACTGAGTTTGTGCTTCCCAATTATAACTAA 1326 0.414 MGSVKVISTTTIQAPSHNNGISTQIIELTPWDLQFLQLETIQKGLLFQQPTLTSNQINHLKQTLSTTLSFFPPLTGRLIITQHNNNNASCSIICNNVGALFVHAKAETTTVSDILQPNYIPSIVHSFFPLNGVRNHESTSQPILAVQVTELSNGIFIAFTINHVVSDGKSFWHFVNSWAQISKGSQQITKLPSLQRWFPNDVQLPIRFPFTITESQNKSTSKKLPERIFHFTKEKILELKSKANSEAKTQTELVTEISSLQALLSHIWRRVIRCKQPGPQEDFRYMLIIGARPRMIPPLDEDYFGNAAVIGGVYMKAEEILESGIGKVGLEMNKMIMLHSDEKIRKHYECWLRVPRLLEISGLANGNSLATSSSPRFDVYGNDFGWGKPVAVRSGGANKNNGKITVYAGAEEGSIDIEVCLSYEILEALGNDTEFVLPNYN* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2013 441 Gene3D - 2 206 IPR023213 -
Psa4g2013 441 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 436 - -
Psa4g2013 441 Pfam Transferase family 3 435 - -
Psa4g2013 441 Gene3D - 210 431 IPR023213 -
Psa4g2013 441 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2013 Psa-Chr4 152649745 152651516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2013 45 427 Monolignol Biosynthesis Gene Families AT5G48930 26.214 1.84e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2013 - - gmx:100500257 561.992