Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2011 ATGCAAGATCTTCTGGAATTGTCAGAGGAATTTGCTTTGGTGCGTTATCATGATCAAGTGGCTCTAGAGAGGTTGTTTAGAGTTGATGATATAAGAGTCGGTTCCACTTCTCGAAAGGCAATTCCTGCCCTAGTTGATCTTCTCAAACCAATTCCGGGTCGCCCAGGGGCACCATTTTTAGCTCTCGGAATTTTGACTCAGCTTGGCAGAGATTGTCCGTCAAACAAGACTGTAATGGTAGAATCTGGGACTTTAGAGACCCTTACAAAGTATCTTTCCTTTGGTCCACAAGATGCAACCGAAGAAGCTGCTACAGATCTACTAGGAATTCTCCTTAGTAGTGCTGATATACGAAAACGTGACTCTGCATTTGGTGTTGTTAACCAACTTATAGCTGTCCTACGTTTAGGAGGAAGAGCTGCAAGGCTTAGTGATGCAAAATCATTGGAAAGTTTATTTTCTGCTGACCACATTAGAAATGCTGAGATTGCTCGACAAGCTATTCAACCCTTGGTAGAAATTCTTAACACTGGTTCAGAAAGGGAGCAGCATGCTGCAATTGCTGCATTGGTTGGGTTATTGAGTGAAAACCCATCTAAAGCACTTGCTGTTGCAGATGTTGAAATGGATGCAGTGGATGTTCTTTATAGGATCCTTTCGTCGAATTGTTCAATTGACCTGATAGGGGATGCTGCTGAGTTATGTTGTGCTCTTTTTGGAAATACAAGGATTCGGTCCACAACGGCTGCTACGCGATGTGTTGAACCATTGGTCGCACTCCTTGCAACCGAGTTTAGTCCGGCTCATCATTCAGTTGTTCGGGCACTGGATAAGCTCGTTGATGATGAGCAAGTGGCTGAACTAATTGCCACACACAATGCAGTTGTCCCTCTGGTTAGTCTACTGTCTGGTAGAAACTTTGTACTTCATGAGGCCATTTCCAGAGCTCTGGTCAAGTTAGGAGAAGACAGACCTGCTTGTAAAATGGAAATGCTTTTGCAGAACTGTTGCGTATATTAA 1020 0.4363 MQDLLELSEEFALVRYHDQVALERLFRVDDIRVGSTSRKAIPALVDLLKPIPGRPGAPFLALGILTQLGRDCPSNKTVMVESGTLETLTKYLSFGPQDATEEAATDLLGILLSSADIRKRDSAFGVVNQLIAVLRLGGRAARLSDAKSLESLFSADHIRNAEIARQAIQPLVEILNTGSEREQHAAIAALVGLLSENPSKALAVADVEMDAVDVLYRILSSNCSIDLIGDAAELCCALFGNTRIRSTTAATRCVEPLVALLATEFSPAHHSVVRALDKLVDDEQVAELIATHNAVVPLVSLLSGRNFVLHEAISRALVKLGEDRPACKMEMLLQNCCVY* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2011 339 PANTHER CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 1 332 - -
Psa4g2011 339 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 1 332 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Psa4g2011 339 SUPERFAMILY ARM repeat 22 331 IPR016024 -
Psa4g2011 339 Gene3D - 209 337 IPR011989 -
Psa4g2011 339 Gene3D - 13 208 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2011 Psa-Chr4 152469168 152470254 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2011 68 204 U-box Gene Family AT5G42340 29.197 4.73e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2011 - - mtr:MTR_8g091470 568.155