Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2007 ATGCCTTGGCACAATTCTAGTCTTCTTGTTGTCCCTTGCAGCATTTCCAGCCAATTCAAGAACCTCAGCAAATCAGCATTAACTTCAACAATTTCCTTACTTCCTAATTCCAATTTGGATAAGTCTGTTTGTAACAAAAGCAATGCAAAACGTGACACTCAGCAGATTATCCAGCCTTACCTATCCGATATCTCAGATTACCTTCGCACAATGGAGATGCAGGAAAAACGAAGACCAGCGGGTGATTACATGGATAAAGTTCAGAGATGCATTACTACAAATATGAGGAGAACATTGGTGGATTGGTTAGTTGAGGTTGCGGATGAATACAAACTTCTCCCAGAAACTCTTCATCTAGCTGTTTCCTACATTGACAGATTCCTATCTATCCATTCTCTCAATAGATCCAAGCTTCAGCTGCTCGGTGTTTCCGCTATGCTCATTGCATCGAAGTATGAAGAAATCACTCCACCAAAAGCAGTGGATTTCTGCCAAATTACTGATAACACATATGAACTGCATGAGGTTTT 530 0.4057 MPWHNSSLLVVPCSISSQFKNLSKSALTSTISLLPNSNLDKSVCNKSNAKRDTQQIIQPYLSDISDYLRTMEMQEKRRPAGDYMDKVQRCITTNMRRTLVDWLVEVADEYKLLPETLHLAVSYIDRFLSIHSLNRSKLQLLGVSAMLIASKYEEITPPKAVDFCQITDNTYELHEV 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2007 176 ProSitePatterns Cyclins signature. 96 127 IPR006671 -
Psa4g2007 176 Gene3D - 77 176 - -
Psa4g2007 176 PANTHER CYCLIN-A3-1-RELATED 17 176 - -
Psa4g2007 176 SUPERFAMILY Cyclin-like 54 175 IPR036915 -
Psa4g2007 176 PANTHER CYCLINS 17 176 IPR039361 -
Psa4g2007 176 Pfam Cyclin, N-terminal domain 63 175 IPR006671 -
Psa4g2007 176 Gene3D - 63 76 - -
Psa4g2007 176 SMART cyclin_7 101 175 IPR013763 -
Psa4g2007 176 CDD CYCLIN 95 172 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2007 Psa-Chr4 152444363 152444892 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2007 24 176 Core Cell Cycle Gene Families AT1G47210 54.902 1.06e-51 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2007 K06627 - cpap:110818790 176.022