Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Psa4g2004 | ATGGAACCATCGGAGAATTGTTCCGTTAAAGTCGCTCTTCACATTCGTCCACTCATTGCTGATGAACGTCAACAAGGTTGCACTCAATGTGTTTCTGTGAACCCTGGAAAGCCTCAGGTTCAAATAGGGTCTCATTCCTTTACATTTGACCATGTTTATGGAAATGGTGGATCTCCTTCATCTGAGATGTTTGAGGAATGCGTTGCTCCATTGGTTGATGGCTTATTTCAAGGATACAATGCTACTGTGCTTGCTTATGGTCAGACAGGATCCGGGAAAACGTATACCATGGGAACTGCCTGCAATGACAATACCGGGATTGGATTGATTCCTCAGGTTATGAATGCCTTGTTCAACAAGATTGAAACTCTAAAGCATCAAACGGAATTTCAGTTGCATGTTTCCTTCATTGAGATTTTGAAGGAAGAGGTAAGGGACTTGTTGGACATGGTATCAATGGGAAAATCAGATAACTCTAGCTCTAATGGCCATTCTGGAAAAGTAACCATTCCTGGGAAACCACCGATACAAATTCGCGAATCATCAAGTGGAGTAATAACACTGGCAGGGTCAACTGAAGTTTCTGTAAGTACATTACAGGAGATGGCTGCTTACTTGGATCGAGGTTCATTAAATAGAGCAACAGGAAGTACAAACATGAACAACCAATCCAGTCGGTCACATGCCATCTTCACAATCACGTTAGAACAGATGCGCAAACTCCATTTATTTTCTTCCTGCAATGACACTTCGGATGAGGATATGGGAGAAGAATACCTTTCAGCAAAGCTCCATTTGGTAGATCTAGCTGGATCAGAACGAGCTAAAAGAACTGGTTCTGATGGTCTTCGTTTAAAAGAAGGTATACACATCAATAGAGGTCTTCTTGCGCTTGGTAATGTCATAAGTGCACTGGGGGATGAGAAAAAACGAAAGGAGGGTGTACATGTCCCTTATCGCGATAGCAAACTCACTCGACTTTTACAGGATTCACTTGGAGGAAACAGCAAAACTGTCATGATAGCTTGCATTAGCCCTGCTGACATCAATACTGAGGAAACTCTTAATACCCTTAAGTATGCAAACCGTGCACGTAACATTCAAAATAAGCCTGTTGCTAATCGAGATTTGCTATCCAATGAGATGCAGCAAATGCGCCAGCAGTTAAAGTACTTGCAGGCTGAGCTCTGTTCTCGAGGAGGTGGTTCAGTTGAAGTGCAGGTTCTTAAAGAAAAGATTGCTTGGCTTGAGGAAACTAATGAGGAACTCTGTCGAGAGCTTCATAAATATCGCAGTAGATCTTCTTTAGCAGAAAGATGTGATATTCACGAAACAGATGGACATATTCATCTCATGAAAAATAACGGGCTTGAGAGACACTTTGCAAGCTCGGAATTAACTGACCATCTAATGGCGGGAAGCATGTCAGGTGAGGTTTCAAAGGAAGCTGATGAAGTAGAAAAAGAATTGGAGCATACACTGCTGCTAAATACCATGGATAAAGAAATGCACGAGTTAAATAAGCAATTGGAGCAGAAAGAGACGGAGATGAAGCTTGTGGGAGTTGATACTGAAGCACTCAGGCAGCACTTTGGAAAGAAAATGATGGAACTCGAGGAAGAGAAAAGAAAAGTCCAGCAAGAAAGGGATCGGTTATTGCATGAAGTAGAGAATCTTGCAGTTAATTCAAATGGATTGGCACATAAAACACATGATGTTCGTGGCCAAAAATTGAAAGCATTGGAAGCACAGATTTTAGAGCTCAAGAAGAAACAAGAAAACCAGGTGCAGCTACTAAAGCAAAAGGAAAAGAGTGAAGAAGCTGCCAAAAGACTGCAAGCTGAGATACAGTATATCAAGGCTCAAAAGGTTCAGTTGCAGCATAAAATAAAACAAGAGGCAGAACAATTTCGACAATGGAAAACTTCCCGTGAAAAGGAGTTACTCCAGTTAAAAAAGGAGGGAAGAAGGAATGAGTATGAAAGGCATAAACTTGAGGCTCTAAACCAACGCCAGAAACTGGTTCTTCATAGAAAGACAGAGGAAGCAACAATGGCTACCAAAAGGCTAAAGGAATTGTTAGAAGCTCGCAAATCTTCTCCGCGCGACCATTCTGTTTATTCAAATGGACATCTACAGCCTGGGCAGATTAGTGAAAAATCCCTCCAGAGGTGGCTTGATCAGGAGCTGGAGGTAATGGTACATGTGCATGAAGTCCGTGCTGAATTTGATGAACAAAACCAAGTTCATGCTGCACTGGAAGGAGAATTGGCTTTTCTGAAACAAGTGGATCAGCTTTCAGATAGGCAGTGTATCCCCACAGGAAACAGTCGATATTCACGACTGTTATCCATGTCACCAGATGCAAAAGCTGCAAGAATAACTTCTCTTGAAAACATGCTGGGCACGTCGTCAGCGGCTTTGAAAGCAATGACTTCACAACTTACCGAGGCAGAAGAAAGGGAACGTGCATTAAATAACCGTGGACGATGGAATCAGTTACGCTCAATGGGAGAGGCAAAAAATGTGCTTCCGTATTTGTTCAATGCTACCGCAGAAGCAAGGTGTCAATTGTGGGAAAAGAATATGGAACTGAAGGACTTAAAAGAGAAACTTAATGAGCTTGTAACACTACTACAACAAAGTGAAGCGCAGAGAAAGGAACTTGAAAAAGAGAAAGCGATTGGTGAACAAGCAGTTGCCATCACATTGCATACGCCACCGTCGGAAAGCTCACGGTCCTTGAAACACCTTGCGGATGAAATGAGTGGTCCGTTGTCCCCAATGTCGCTTCCTGCGCCAAAACAACTCAAATTCACCCCTGGAGTTGTTAACGGGTCAGTGAGGGAGTCAGTTACATTTATAGATGACGGACGGAAGATGATACCTATTGGAGAATTGTCAATGAAGAGACTAGCAGCTATAGGACAAGCCGGAAAACTTTGGAGGTGGAAGAGAAGTCATCATCAATGGCTGCTACAGTTTAAATGGAAGTGGCAGAAGCCCTGGAAACTCTCAGAATTGATCAAACACAGTGATGAAACAATCATGAAATCAAGGCCTCGAGGACAAGCTTTGATTAATGTTGCGTGA | 3093 | 0.4255 | MEPSENCSVKVALHIRPLIADERQQGCTQCVSVNPGKPQVQIGSHSFTFDHVYGNGGSPSSEMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTACNDNTGIGLIPQVMNALFNKIETLKHQTEFQLHVSFIEILKEEVRDLLDMVSMGKSDNSSSNGHSGKVTIPGKPPIQIRESSSGVITLAGSTEVSVSTLQEMAAYLDRGSLNRATGSTNMNNQSSRSHAIFTITLEQMRKLHLFSSCNDTSDEDMGEEYLSAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINTEETLNTLKYANRARNIQNKPVANRDLLSNEMQQMRQQLKYLQAELCSRGGGSVEVQVLKEKIAWLEETNEELCRELHKYRSRSSLAERCDIHETDGHIHLMKNNGLERHFASSELTDHLMAGSMSGEVSKEADEVEKELEHTLLLNTMDKEMHELNKQLEQKETEMKLVGVDTEALRQHFGKKMMELEEEKRKVQQERDRLLHEVENLAVNSNGLAHKTHDVRGQKLKALEAQILELKKKQENQVQLLKQKEKSEEAAKRLQAEIQYIKAQKVQLQHKIKQEAEQFRQWKTSREKELLQLKKEGRRNEYERHKLEALNQRQKLVLHRKTEEATMATKRLKELLEARKSSPRDHSVYSNGHLQPGQISEKSLQRWLDQELEVMVHVHEVRAEFDEQNQVHAALEGELAFLKQVDQLSDRQCIPTGNSRYSRLLSMSPDAKAARITSLENMLGTSSAALKAMTSQLTEAEERERALNNRGRWNQLRSMGEAKNVLPYLFNATAEARCQLWEKNMELKDLKEKLNELVTLLQQSEAQRKELEKEKAIGEQAVAITLHTPPSESSRSLKHLADEMSGPLSPMSLPAPKQLKFTPGVVNGSVRESVTFIDDGRKMIPIGELSMKRLAAIGQAGKLWRWKRSHHQWLLQFKWKWQKPWKLSELIKHSDETIMKSRPRGQALINVA* | 1031 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Psa4g2004 | 1030 | Coils | Coil | 375 | 395 | - | - | |
Psa4g2004 | 1030 | Pfam | Kinesin motor domain | 16 | 367 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Psa4g2004 | 1030 | CDD | KISc_KIF4 | 7 | 368 | - | - | |
Psa4g2004 | 1030 | Coils | Coil | 406 | 433 | - | - | |
Psa4g2004 | 1030 | Coils | Coil | 496 | 516 | - | - | |
Psa4g2004 | 1030 | Coils | Coil | 578 | 629 | - | - | |
Psa4g2004 | 1030 | PRINTS | Kinesin heavy chain signature | 78 | 99 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Psa4g2004 | 1030 | PRINTS | Kinesin heavy chain signature | 218 | 235 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Psa4g2004 | 1030 | PRINTS | Kinesin heavy chain signature | 263 | 281 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Psa4g2004 | 1030 | PRINTS | Kinesin heavy chain signature | 317 | 338 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Psa4g2004 | 1030 | Coils | Coil | 808 | 828 | - | - | |
Psa4g2004 | 1030 | Coils | Coil | 676 | 696 | - | - | |
Psa4g2004 | 1030 | Coils | Coil | 528 | 562 | - | - | |
Psa4g2004 | 1030 | Coils | Coil | 858 | 899 | - | - | |
Psa4g2004 | 1030 | PANTHER | KINESIN-LIKE PROTEIN KIN-4B | 1 | 1029 | - | - | |
Psa4g2004 | 1030 | Gene3D | Kinesin motor domain | 1 | 395 | IPR036961 | - | |
Psa4g2004 | 1030 | ProSiteProfiles | Kinesin motor domain profile. | 8 | 367 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Psa4g2004 | 1030 | SMART | kinesin_4 | 6 | 375 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Psa4g2004 | 1030 | PANTHER | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED | 1 | 1029 | - | - | |
Psa4g2004 | 1030 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 8 | 398 | IPR027417 | - | |
Psa4g2004 | 1030 | ProSitePatterns | Kinesin motor domain signature. | 262 | 273 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Psa4g2004 | Psa-Chr4 | 151385727 | 151395763 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Psa4g2004 | 9 | 400 | Calmodulin-binding Proteins | AT5G65930 | 34.005 | 1.72e-52 | 199 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Psa4g2004 | - | - | gmx:100790341 | 1673.29 |