Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g2004 ATGGAACCATCGGAGAATTGTTCCGTTAAAGTCGCTCTTCACATTCGTCCACTCATTGCTGATGAACGTCAACAAGGTTGCACTCAATGTGTTTCTGTGAACCCTGGAAAGCCTCAGGTTCAAATAGGGTCTCATTCCTTTACATTTGACCATGTTTATGGAAATGGTGGATCTCCTTCATCTGAGATGTTTGAGGAATGCGTTGCTCCATTGGTTGATGGCTTATTTCAAGGATACAATGCTACTGTGCTTGCTTATGGTCAGACAGGATCCGGGAAAACGTATACCATGGGAACTGCCTGCAATGACAATACCGGGATTGGATTGATTCCTCAGGTTATGAATGCCTTGTTCAACAAGATTGAAACTCTAAAGCATCAAACGGAATTTCAGTTGCATGTTTCCTTCATTGAGATTTTGAAGGAAGAGGTAAGGGACTTGTTGGACATGGTATCAATGGGAAAATCAGATAACTCTAGCTCTAATGGCCATTCTGGAAAAGTAACCATTCCTGGGAAACCACCGATACAAATTCGCGAATCATCAAGTGGAGTAATAACACTGGCAGGGTCAACTGAAGTTTCTGTAAGTACATTACAGGAGATGGCTGCTTACTTGGATCGAGGTTCATTAAATAGAGCAACAGGAAGTACAAACATGAACAACCAATCCAGTCGGTCACATGCCATCTTCACAATCACGTTAGAACAGATGCGCAAACTCCATTTATTTTCTTCCTGCAATGACACTTCGGATGAGGATATGGGAGAAGAATACCTTTCAGCAAAGCTCCATTTGGTAGATCTAGCTGGATCAGAACGAGCTAAAAGAACTGGTTCTGATGGTCTTCGTTTAAAAGAAGGTATACACATCAATAGAGGTCTTCTTGCGCTTGGTAATGTCATAAGTGCACTGGGGGATGAGAAAAAACGAAAGGAGGGTGTACATGTCCCTTATCGCGATAGCAAACTCACTCGACTTTTACAGGATTCACTTGGAGGAAACAGCAAAACTGTCATGATAGCTTGCATTAGCCCTGCTGACATCAATACTGAGGAAACTCTTAATACCCTTAAGTATGCAAACCGTGCACGTAACATTCAAAATAAGCCTGTTGCTAATCGAGATTTGCTATCCAATGAGATGCAGCAAATGCGCCAGCAGTTAAAGTACTTGCAGGCTGAGCTCTGTTCTCGAGGAGGTGGTTCAGTTGAAGTGCAGGTTCTTAAAGAAAAGATTGCTTGGCTTGAGGAAACTAATGAGGAACTCTGTCGAGAGCTTCATAAATATCGCAGTAGATCTTCTTTAGCAGAAAGATGTGATATTCACGAAACAGATGGACATATTCATCTCATGAAAAATAACGGGCTTGAGAGACACTTTGCAAGCTCGGAATTAACTGACCATCTAATGGCGGGAAGCATGTCAGGTGAGGTTTCAAAGGAAGCTGATGAAGTAGAAAAAGAATTGGAGCATACACTGCTGCTAAATACCATGGATAAAGAAATGCACGAGTTAAATAAGCAATTGGAGCAGAAAGAGACGGAGATGAAGCTTGTGGGAGTTGATACTGAAGCACTCAGGCAGCACTTTGGAAAGAAAATGATGGAACTCGAGGAAGAGAAAAGAAAAGTCCAGCAAGAAAGGGATCGGTTATTGCATGAAGTAGAGAATCTTGCAGTTAATTCAAATGGATTGGCACATAAAACACATGATGTTCGTGGCCAAAAATTGAAAGCATTGGAAGCACAGATTTTAGAGCTCAAGAAGAAACAAGAAAACCAGGTGCAGCTACTAAAGCAAAAGGAAAAGAGTGAAGAAGCTGCCAAAAGACTGCAAGCTGAGATACAGTATATCAAGGCTCAAAAGGTTCAGTTGCAGCATAAAATAAAACAAGAGGCAGAACAATTTCGACAATGGAAAACTTCCCGTGAAAAGGAGTTACTCCAGTTAAAAAAGGAGGGAAGAAGGAATGAGTATGAAAGGCATAAACTTGAGGCTCTAAACCAACGCCAGAAACTGGTTCTTCATAGAAAGACAGAGGAAGCAACAATGGCTACCAAAAGGCTAAAGGAATTGTTAGAAGCTCGCAAATCTTCTCCGCGCGACCATTCTGTTTATTCAAATGGACATCTACAGCCTGGGCAGATTAGTGAAAAATCCCTCCAGAGGTGGCTTGATCAGGAGCTGGAGGTAATGGTACATGTGCATGAAGTCCGTGCTGAATTTGATGAACAAAACCAAGTTCATGCTGCACTGGAAGGAGAATTGGCTTTTCTGAAACAAGTGGATCAGCTTTCAGATAGGCAGTGTATCCCCACAGGAAACAGTCGATATTCACGACTGTTATCCATGTCACCAGATGCAAAAGCTGCAAGAATAACTTCTCTTGAAAACATGCTGGGCACGTCGTCAGCGGCTTTGAAAGCAATGACTTCACAACTTACCGAGGCAGAAGAAAGGGAACGTGCATTAAATAACCGTGGACGATGGAATCAGTTACGCTCAATGGGAGAGGCAAAAAATGTGCTTCCGTATTTGTTCAATGCTACCGCAGAAGCAAGGTGTCAATTGTGGGAAAAGAATATGGAACTGAAGGACTTAAAAGAGAAACTTAATGAGCTTGTAACACTACTACAACAAAGTGAAGCGCAGAGAAAGGAACTTGAAAAAGAGAAAGCGATTGGTGAACAAGCAGTTGCCATCACATTGCATACGCCACCGTCGGAAAGCTCACGGTCCTTGAAACACCTTGCGGATGAAATGAGTGGTCCGTTGTCCCCAATGTCGCTTCCTGCGCCAAAACAACTCAAATTCACCCCTGGAGTTGTTAACGGGTCAGTGAGGGAGTCAGTTACATTTATAGATGACGGACGGAAGATGATACCTATTGGAGAATTGTCAATGAAGAGACTAGCAGCTATAGGACAAGCCGGAAAACTTTGGAGGTGGAAGAGAAGTCATCATCAATGGCTGCTACAGTTTAAATGGAAGTGGCAGAAGCCCTGGAAACTCTCAGAATTGATCAAACACAGTGATGAAACAATCATGAAATCAAGGCCTCGAGGACAAGCTTTGATTAATGTTGCGTGA 3093 0.4255 MEPSENCSVKVALHIRPLIADERQQGCTQCVSVNPGKPQVQIGSHSFTFDHVYGNGGSPSSEMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTACNDNTGIGLIPQVMNALFNKIETLKHQTEFQLHVSFIEILKEEVRDLLDMVSMGKSDNSSSNGHSGKVTIPGKPPIQIRESSSGVITLAGSTEVSVSTLQEMAAYLDRGSLNRATGSTNMNNQSSRSHAIFTITLEQMRKLHLFSSCNDTSDEDMGEEYLSAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINTEETLNTLKYANRARNIQNKPVANRDLLSNEMQQMRQQLKYLQAELCSRGGGSVEVQVLKEKIAWLEETNEELCRELHKYRSRSSLAERCDIHETDGHIHLMKNNGLERHFASSELTDHLMAGSMSGEVSKEADEVEKELEHTLLLNTMDKEMHELNKQLEQKETEMKLVGVDTEALRQHFGKKMMELEEEKRKVQQERDRLLHEVENLAVNSNGLAHKTHDVRGQKLKALEAQILELKKKQENQVQLLKQKEKSEEAAKRLQAEIQYIKAQKVQLQHKIKQEAEQFRQWKTSREKELLQLKKEGRRNEYERHKLEALNQRQKLVLHRKTEEATMATKRLKELLEARKSSPRDHSVYSNGHLQPGQISEKSLQRWLDQELEVMVHVHEVRAEFDEQNQVHAALEGELAFLKQVDQLSDRQCIPTGNSRYSRLLSMSPDAKAARITSLENMLGTSSAALKAMTSQLTEAEERERALNNRGRWNQLRSMGEAKNVLPYLFNATAEARCQLWEKNMELKDLKEKLNELVTLLQQSEAQRKELEKEKAIGEQAVAITLHTPPSESSRSLKHLADEMSGPLSPMSLPAPKQLKFTPGVVNGSVRESVTFIDDGRKMIPIGELSMKRLAAIGQAGKLWRWKRSHHQWLLQFKWKWQKPWKLSELIKHSDETIMKSRPRGQALINVA* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g2004 1030 Coils Coil 375 395 - -
Psa4g2004 1030 Pfam Kinesin motor domain 16 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa4g2004 1030 CDD KISc_KIF4 7 368 - -
Psa4g2004 1030 Coils Coil 406 433 - -
Psa4g2004 1030 Coils Coil 496 516 - -
Psa4g2004 1030 Coils Coil 578 629 - -
Psa4g2004 1030 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa4g2004 1030 PRINTS Kinesin heavy chain signature 218 235 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa4g2004 1030 PRINTS Kinesin heavy chain signature 263 281 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa4g2004 1030 PRINTS Kinesin heavy chain signature 317 338 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa4g2004 1030 Coils Coil 808 828 - -
Psa4g2004 1030 Coils Coil 676 696 - -
Psa4g2004 1030 Coils Coil 528 562 - -
Psa4g2004 1030 Coils Coil 858 899 - -
Psa4g2004 1030 PANTHER KINESIN-LIKE PROTEIN KIN-4B 1 1029 - -
Psa4g2004 1030 Gene3D Kinesin motor domain 1 395 IPR036961 -
Psa4g2004 1030 ProSiteProfiles Kinesin motor domain profile. 8 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa4g2004 1030 SMART kinesin_4 6 375 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Psa4g2004 1030 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1029 - -
Psa4g2004 1030 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 398 IPR027417 -
Psa4g2004 1030 ProSitePatterns Kinesin motor domain signature. 262 273 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g2004 Psa-Chr4 151385727 151395763 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g2004 9 400 Calmodulin-binding Proteins AT5G65930 34.005 1.72e-52 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g2004 - - gmx:100790341 1673.29