Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1989 ATGAACCAAAAAGGACTTCTCTTTCATAATCCCCAAAACCCAAATGAAACATCAAACCAAATCCAACATCTCAAAAACTCACTTTCCTCAACTTTTGCTTTCTTCCCACCTCTCTCCGGTCGTCTCATCGTCGACGACGACAACAAAAACAAAACCTCATGTTTCATCCTTTGCAACAACCTAGGTGCATTGTTTATCCATGCAATAGCTGAAAACATAAGTGTCTCCGACATTCTTAAACCAAACTATGTTCCTCCGATTGTTCAATCTTTTTTTCCATTAAATAAAGCCAAAAACTATGAAGGCACATCAAAACCATTACTTGCTGTGCAAGTTACTGAGCTTGTTGATGGTATCTTCATTGGCTTCTCAATCAATCATGCTGTTGTGGACGGTAAGTCGTTTTGGCATTTCATCAATTCATGGTCCGAAATCTCACGTGGTTTCGATCAACCATCGAAACTCCCAACATTTAATCATTGGTTTCTCGATGACTCAATTGAAACTCCCATTAAATTTCCTTTTACAAAAGAGGATAACCTAAAAACTACTGAAACTGATGAAAACTCTCTTCCACTTGAGAGGATTTTTCATTTTACAAAGGAGAAAATTGCGAAACTCAAATCAAAAGCTAATGAAGAGGCTAATACAAACAAAATATCTTCTCTACAAGCACTTTTAACTCATCTTTGGCGAAATGTGATTCGTTATCACAATATCGACCTTGAAGAAGAAATCATGTATTATTTAGTCATCGATGTTCGAGGGAGAGTTGTTCCGCCGTTGTCAAAGAATTACTTTGGAAATGCCTTGCAGGTTGGTGGTGTGAAAGTGAAAGCAAAGGAGCTATTTGTTGAAAGAGGGTTTGGAAAAGTTGCTTTTGAGATGAACAGGATGATACGTTCATATGGTGATGATACTTTGAAGAAAAACTATGAAAATTGGGTGAAAAATCCAAGCTTGTTTCAAGGAAGGCTTAGTAGTATTAAGGCTTTGGCAACTAGTAGTTCTCCAAGGTTTGATTTTTATGGTAATGATTTTGGTTGGGGGAGGCCTGTTGCTGTTAGAAGTGGGGGTGCAAATAAAAGTGATGGAACTATTACTATGTTTTGTGGGGAAGAAGAAGATAGGATTGATGTTGAAGTTTGTCTTTCTTATGATATTTTGGAAGCTATGGGAAATGATCCTCAATTCATAAATATCTTTTAA 1209 0.3689 MNQKGLLFHNPQNPNETSNQIQHLKNSLSSTFAFFPPLSGRLIVDDDNKNKTSCFILCNNLGALFIHAIAENISVSDILKPNYVPPIVQSFFPLNKAKNYEGTSKPLLAVQVTELVDGIFIGFSINHAVVDGKSFWHFINSWSEISRGFDQPSKLPTFNHWFLDDSIETPIKFPFTKEDNLKTTETDENSLPLERIFHFTKEKIAKLKSKANEEANTNKISSLQALLTHLWRNVIRYHNIDLEEEIMYYLVIDVRGRVVPPLSKNYFGNALQVGGVKVKAKELFVERGFGKVAFEMNRMIRSYGDDTLKKNYENWVKNPSLFQGRLSSIKALATSSSPRFDFYGNDFGWGRPVAVRSGGANKSDGTITMFCGEEEDRIDVEVCLSYDILEAMGNDPQFINIF* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1989 402 Gene3D - 1 168 IPR023213 -
Psa4g1989 402 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 2 400 - -
Psa4g1989 402 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 2 400 - -
Psa4g1989 402 Pfam Transferase family 2 395 - -
Psa4g1989 402 Gene3D - 192 394 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1989 Psa-Chr4 149560071 149561502 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1989 8 359 Monolignol Biosynthesis Gene Families AT5G48930 28.457 2.28e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1989 - - gmx:100500257 458.373