Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1985 ATGGCAGTAAAACTCATGACAGGTTACAACACAGCCAAAACTTTCACTTCCATAGCCGAAGAAAATGCTGTCCAAGAAGCTGCTTCGGGCTTAGAAAGCGTTGAGAAACTCATCAAATTACTCTCTGAAGCACGCCATAAATACCAAACCTCTTCATCTTCATCTTCCTTTTCACCTTCAAATCCCAACAACAACAACAACACTTCCATGGAAATTGAAAGAGACTGCAAAGCCGTCGCTGACATCGCTGTTTCCAAATTCAAACGTGTTATTTCACTTCTCGAAAAAACCAGAACCGGGCACGCTCGTTTCAGAAAAGCTCCTTTACCTCAAACTCAACCTTCTGAACGAACAATCTTCAACGCTACACCTCTTCAACAGATTCCACCACCACCACCACCAACAACAACAACAACACTTCACCGCGCTATAATCAAGAGAAACGACTCATCGAAAACCCTTAACTTTTCATACTCATCCGCTGCTAATTCATTCATTTCCTCACTCACCGGCGACACAGACAACAAACAGCAACCGTCATCTTCGTCGCCGGCTGGAGCTTTTCAGATCACGAATCTTTCTCATGTTTCATCTATTGGTAAGCCACCACTGTCTTCTTCTTCCATGAAAAGAAAGTGTAGCTCTGAAACTCTGGGTTCTGGAAAGTGTGGTAGTTCATCTAGCCGCTGTCATTGTTCCAAAAAAAGTAGAAAATTAAGATTGAAGAGGGTTGTTAGGGTTCCTGCTATCAGCTTGAAGATGGCTGATATTCCACCAGATGATTACTCTTGGCGAAAATATGGACAGAAACCTATTAAGGGTTCACCTCATCCAAGAGGATACTACAAGTGCAGTAGTGTGAGAGGTTGTCCAGCAAGAAAACATGTAGAGAGAGCACTTGATGATGCATCTATGTTGGTGGTAACCTATGAAGGAGAACACAATCACTCACTTTCTGCAGCAGATGCAACTAATCTCATTTTAGAGTCATCTTAA 996 0.4257 MAVKLMTGYNTAKTFTSIAEENAVQEAASGLESVEKLIKLLSEARHKYQTSSSSSSFSPSNPNNNNNTSMEIERDCKAVADIAVSKFKRVISLLEKTRTGHARFRKAPLPQTQPSERTIFNATPLQQIPPPPPPTTTTTLHRAIIKRNDSSKTLNFSYSSAANSFISSLTGDTDNKQQPSSSSPAGAFQITNLSHVSSIGKPPLSSSSMKRKCSSETLGSGKCGSSSSRCHCSKKSRKLRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDASMLVVTYEGEHNHSLSAADATNLILESS* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1985 331 ProSiteProfiles WRKY domain profile. 253 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa4g1985 331 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 16 331 - -
Psa4g1985 331 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 331 IPR044810 GO:0003700
Psa4g1985 331 Gene3D WRKY domain 244 319 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa4g1985 331 Pfam Plant zinc cluster domain 210 256 IPR018872 -
Psa4g1985 331 SUPERFAMILY WRKY DNA-binding domain 255 318 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa4g1985 331 Pfam WRKY DNA -binding domain 260 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa4g1985 331 SMART WRKY_cls 258 318 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1985 Psa-Chr4 149433729 149435633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1985 18 319 WRKY Transcription Factor Family AT2G24570 43.413 1.22e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa4g1985 WRKY 9.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1985 - - qsu:112030051 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1985 4 149433729 149435633 Psa4g1985 4 149433729 149435633 ECH