Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1963 ATGTATTACACCATCCTTGCTATTATTTCCCTTATAACATTAAAATTTCTATTAATCACAACAAAAAGATTCAAAAACCTTCCACCAGGTCCACTCAGTATTCCCATAATTGGCAACATTTACCAACTCAAACACCCACTTCACCGCACTCTCCACAATCTCTCACAAATATACGGCCAAGTTTTTTCCCTACGCTTCGGTTCTCGTTTAGTCGTAGTTGTTTCATCACCCTCAGTCGTACACGAATGTTTCACCAAAAACGACACCGTTTTAGCAAACCGTCCGCCTCTTCTCGCCGGCAAACACTTAGGCTACAACTACACCGCCGTTACGGTGGCACCTTACGGCGATCACTGGCGTAACGTCCGCCGTATAATCTCACTCGAGATACTCTCGACTCACCGTTTGAATTCCTTTTTAGGAATCAGGAAAGATGAAATCAAGAAACTCGTGCAAAACCTGGCTCATGATTCTGGAGATAGTTTTGCAAAAGTGGAATTGAAGTCGAAGTTTTCGGAGATGACTTTTAACATGATAATGAGAATGATATCTGGAAAAAGGTATTATGGAGAGGATTGTGATGTAAGCGATGAGGAAGAAGCGAAGAGATTTAGGGAGGTGATTACGGAGTTTATTTCGGTGGGAGGATCGAGTAATCCTAGTGAATTTGTTTGGATTTTTAGGTTGTTTGATTTTGGTAGTTATGAGAAGAGGTTGAAGAGGATTGCTAGAAGATTTGATGGGTTCTTGCAAGGACTAGTTGATGAACATCGAAGAAAAAAGAAGAATGGGAATACCATGATTGATCATCTCTTGAAATTGCAAGAATCACAGCCAGAGTATTATACTGATCAAATCATCAAAGGAATTGTTCTGGTTATGATCCTTGGAGGAACAGAAACATCAGCTACAACATTAGAATGGGCAATGTCTGCATTACTAAATCATCCAGAAGTGTTGAAGAAGGCTAAAGATGAAATAGATACCAACATAGGACACGATCGCTTAGTCGAAGAGTCAGACATTCCAAAACTCCCTTACCTTCAAAACATAATCCATGAGACGTTTCGGTTGCATCCCGCATTTGCATTATTGGCACCCCATTTTTCTTCAAAAGATTGCACAATAGGAGGTTACAATGTTCCTAAGGGAACTATTTTGTTGGTTAATGCCTGGGCAATTCATAGAGATTCTCAACTATGGAGTGATCCAACAGAGTTCAAGCCAGAGAGGTTTGAGAAAGAAGGGGAAGCTGAAAAGTTGATACCATTTGGATTGGGAAGAAGGGCTTGTCCTGGAGCAAACTTGGGGCAGCGTACAGTAAGTTTAACGTTGGCTTTATGTATTCAATGTTTTGATTGGAAAAGAATAAGTGAGAAAGAAATTGATATGACTGAAGGAAAAGGGGCCACTACACCAAAGCTAGTTCCCTTAGAAGCCATGTGTAAAGCTCGTTTAAATGTCATCAACAAGGTTTTTCTTGAAGCAGATGAAAACATGTCAATGGAGTAA 1512 0.4021 MYYTILAIISLITLKFLLITTKRFKNLPPGPLSIPIIGNIYQLKHPLHRTLHNLSQIYGQVFSLRFGSRLVVVVSSPSVVHECFTKNDTVLANRPPLLAGKHLGYNYTAVTVAPYGDHWRNVRRIISLEILSTHRLNSFLGIRKDEIKKLVQNLAHDSGDSFAKVELKSKFSEMTFNMIMRMISGKRYYGEDCDVSDEEEAKRFREVITEFISVGGSSNPSEFVWIFRLFDFGSYEKRLKRIARRFDGFLQGLVDEHRRKKKNGNTMIDHLLKLQESQPEYYTDQIIKGIVLVMILGGTETSATTLEWAMSALLNHPEVLKKAKDEIDTNIGHDRLVEESDIPKLPYLQNIIHETFRLHPAFALLAPHFSSKDCTIGGYNVPKGTILLVNAWAIHRDSQLWSDPTEFKPERFEKEGEAEKLIPFGLGRRACPGANLGQRTVSLTLALCIQCFDWKRISEKEIDMTEGKGATTPKLVPLEAMCKARLNVINKVFLEADENMSME* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1963 503 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1963 503 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1963 503 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1963 503 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1963 503 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1963 503 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1963 503 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1963 503 PRINTS E-class P450 group I signature 421 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1963 503 PRINTS E-class P450 group I signature 431 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1963 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Psa4g1963 503 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1963 503 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1963 503 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1963 503 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1963 503 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 488 - -
Psa4g1963 503 Pfam Cytochrome P450 28 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1963 503 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 3 488 - -
Psa4g1963 503 SUPERFAMILY Cytochrome P450 28 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Psa4g1963 503 Gene3D Cytochrome P450 20 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1963 Psa-Chr4 145509786 145511518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1963 1 496 Cytochrome P450 AT4G37370 57.315 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1963 K13260 - gmx:100811727 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1963 4 145509786 145511518 Psa4g1963 4 145509786 145511518 ECH