Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1946 ATGGAGTTCTCGTTTCAGAAATCTTTCTCCGTGGTTCTCTTAGTTCTGTTAATGGGTTTCAGCGACGCGTCTTCTTCCTTGAAGAGCACTTACATAGTGCACATGGCGAAATCTGAAATGCCAGAGAGTTATGAGCATCATACTGTATGGTATGAATCGTCGTTACAATCTGTTTCTGACTCAGCTGAAATGATGTATACATACGAAAACGCAATCCATGGATTCTCAACCAGATTAACTGAAGAAGAAGCTCGTTTGCTCGAGAGCCAAACGGGGATTCTAGCGGTGTTGCCGGAGGTTAAATACGAGCTTCACACGACAAGGACTCCTCAGTTTCTTGGCCTTGACAAAAGCGCAGAGATGTTCCCGGAATCAAGTTCAGCAAGCGAGGTTGTTGTCGGTGTTTTAGATACCGGTGTTTGGCCCGAAAGCAAAAGCTTCGACGACACTGGATTTGGACCTATACCCACAACATGGAAAGGCGCGTGTGACACAGGTACGAATTTTACAGCTTCAAACTGCAACAAAAAATTGATCGGAGCAAGGTATTTTTCCAAGGGAGTTGAAGCCATGTTAGGTCCTATTGATGAAACCACAGAGTCGAAATCTCCTAGAGACGACGACGGGCATGGTACTCATACATCAACTACAGCAGCTGGTTCGGTTGTTACCGGTGCTAGCCTCTTCGGTTACGCCTCGGGGACAGCGCGTGGGATGGCCACACGCGCTAGAGTTGCTGCATACAAGGTTTGTTGGAAAGGAGGTTGTTTTAGCTCCGACATTTTAGCTGCTATTGATAAAGCTATTTCGGACGGTGTTAATGTTCTGTCTCTTTCTCTCGGTGGTGGAATGTCTGATTATTATAGAGACAGTGTAGCTATAGGTTCTTTTGCGGCGATGGAGAAAGGGATTCTAATTTCTTGCTCCGCTGGGAATTCGGGTCCAAGTGCTTATTCTCTATCTAATGTAGCTCCATGGATTACTACCGTGGGTGCTGGTACACTGGATCGTGACTTCCCTGCGACCGTTAGTCTTGGTAACGGACTTAACTATTCCGGTGTTTCTCTCTATCGAGGAAACGCTTTGCCGGATTCTCCGTTACCGTTGATTTACGCAGGGAATGCTACTAACGCTACGAACGGGAATTTGTGTATGACGGGAACTTTATCGCCGGAATTAGTTGCTGGGAAGATTGTTTTTTGTGACCGTGGGATGAATGCTAGGGTTCAGAAAGGAGCTGTGGTGAAGGCGGCCGGAGGATTAGGTATGGTGCTAGCCAACACTGCCGCAAACGGCGAGGAGCTTGTTGCTGACACACATCTATTACCAGCCACGGCGGTTGGCGAGAAAGCCGGTAATGCAATCAAGAAATATCTATTTTCCGAGGCGAAACCGACGGTGAAGATTGTTTTCGAAGGAACAAAAGTGGGTGTTCAGCCATCTCCGGTGGTGGCAGCGTTCAGTTCACGAGGACCTAACTCAATCACACCACAGATCTTGAAACCTGATCTTATCGCGCCAGGTGTCAACATATTAGCGGGGTGGTCAAAAGCAGTGGGACCCACCGGTTTGCCGGACGGTAAAAATTTACAAGACAGTGCTACTGGTAAACCCTCCACACCGTTCGATCATGGATCAGGACACGTGGACCCTATCGCTGCACTTGATCCCGGACTTGTTTACGATTTAACTGTGGATGATTACTTAGGTTTTCTCTGTGCGTTAAACTACACATCTACTCAAATCACTGCTTTGGCAAAGAGAAAATTCGAGTGTGACGCGGGTAAAAAATACAGTGTGAATGATCTTAATTATCCATCATTTGCGGTTGTTTTCGACACAATGGGTGGGGCCAACGTAGTAAAACACACGAGAATCCTCACCAACGTGGGACCCGCGGGAAGTTACAAGGCTTCAGTAACATCAGATTCAAAATCCGTGAAAATCACTGTTGAACCGGAGGAGTTAATTTTTAAGGAAAATGAGAAGAAACCTTATACGGTGACGTTTACATCATTGGGTTCTACACCGCAGAAGGTGAATGGATTTGGACGGTTGGAATGGAGGAATGCGAAGAACGTGGTTGGAAGCCCAATCTCGATTAGTTGGGATTGA 2115 0.4671 MEFSFQKSFSVVLLVLLMGFSDASSSLKSTYIVHMAKSEMPESYEHHTVWYESSLQSVSDSAEMMYTYENAIHGFSTRLTEEEARLLESQTGILAVLPEVKYELHTTRTPQFLGLDKSAEMFPESSSASEVVVGVLDTGVWPESKSFDDTGFGPIPTTWKGACDTGTNFTASNCNKKLIGARYFSKGVEAMLGPIDETTESKSPRDDDGHGTHTSTTAAGSVVTGASLFGYASGTARGMATRARVAAYKVCWKGGCFSSDILAAIDKAISDGVNVLSLSLGGGMSDYYRDSVAIGSFAAMEKGILISCSAGNSGPSAYSLSNVAPWITTVGAGTLDRDFPATVSLGNGLNYSGVSLYRGNALPDSPLPLIYAGNATNATNGNLCMTGTLSPELVAGKIVFCDRGMNARVQKGAVVKAAGGLGMVLANTAANGEELVADTHLLPATAVGEKAGNAIKKYLFSEAKPTVKIVFEGTKVGVQPSPVVAAFSSRGPNSITPQILKPDLIAPGVNILAGWSKAVGPTGLPDGKNLQDSATGKPSTPFDHGSGHVDPIAALDPGLVYDLTVDDYLGFLCALNYTSTQITALAKRKFECDAGKKYSVNDLNYPSFAVVFDTMGGANVVKHTRILTNVGPAGSYKASVTSDSKSVKITVEPEELIFKENEKKPYTVTFTSLGSTPQKVNGFGRLEWRNAKNVVGSPISISWD* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1946 704 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 20 524 - -
Psa4g1946 704 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 526 702 - -
Psa4g1946 704 SUPERFAMILY Subtilisin-like 104 559 IPR036852 GO:0004252|GO:0006508
Psa4g1946 704 Gene3D Peptidase S8/S53 domain 131 520 IPR036852 GO:0004252|GO:0006508
Psa4g1946 704 Gene3D Peptidase S8/S53 domain 533 568 IPR036852 GO:0004252|GO:0006508
Psa4g1946 704 Pfam Peptidase inhibitor I9 30 105 IPR010259 -
Psa4g1946 704 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 524 IPR045051 -
Psa4g1946 704 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 526 702 IPR045051 -
Psa4g1946 704 MobiDBLite consensus disorder prediction 196 216 - -
Psa4g1946 704 Gene3D - 336 477 - -
Psa4g1946 704 CDD PA_subtilisin_like 342 469 - -
Psa4g1946 704 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 105 IPR037045 -
Psa4g1946 704 Pfam Fibronectin type-III domain 602 701 IPR041469 -
Psa4g1946 704 Pfam PA domain 382 455 IPR003137 -
Psa4g1946 704 Gene3D - 572 703 - -
Psa4g1946 704 ProSiteProfiles Serine proteases, subtilase domain profile. 101 555 - -
Psa4g1946 704 CDD Peptidases_S8_3 102 335 IPR034197 -
Psa4g1946 704 Pfam Subtilase family 129 518 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1946 Psa-Chr4 143878565 143881287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1946 1 703 Subtilisin-like Serine Gene Family AT5G67360 65.789 0.0 998
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1946 - - gmx:100815413 1049.27