Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1925 ATGGGTGAAGAAATTTTGAGTAGTGCGGTGGTTGTTAGTGTGAGAGAGTTTGATCCAAATAAAGATAGAGAAAGTGTTGAAGCCGTTGAAAAAATATGTGAAGTTGGTCCCAGTGGAAAACTTTCTCTCTTCACCGACTTGCACGGTGACCCTATTTGCAGGGTCCGCAACTCACCAACTTACCTTATGCTGATAGCTGAAGTAGGCAATGAGACAGTCGGAATGATACGAGGTTGCATCAAAACCGTTACATGCGGAAAGAAGATCATAAGACAAACGAAGAACACGAAGAGCTCTGAATCAAATTCCAATCATGTCCCTGTGTTTACGAAACTCGCGTACGTGTTAGGCCTCCGAGTTTCGCCGAATCACAGAAGAATGGGGGTAGGGTTGAAACTGGTACAAAAAATGGAAGAATGGTTCAGAGAGAATGGTGCTGAGTATTCATACATGGCAACGGAAAACGACAACGTTGCATCAGTAAAACTTTTCACCGACAAATGCGGTTACGCAAAGTTTCGTACACCGTCAATCCTCGTGAACCCCGTTTTCGCGCACCGTGTAAAAACGTCGTCGTCGAAGGTAACCATTATGAAGCTTACACCAAACGACGCCGAATCGATTTACCGTAACAAATTCTCCACCACCGAGTTTTTTCCTCGTGACATTGATTCTGTTTTGAAAAACAAACTCACTCTCGGAACTTTTCTCGCTGTTCCGTCTGATGGAAACTATGGGCCTGATAATTGGGCCGGGCCGGAAGCATTTTTAATGGATCCACCGGGTTCATGGGCTTTAGTCAGTGTTTGGAACTGTAAAGACTTGTTTACCCTTGAAGTGAAAGGCGCGTCGCGCGTGAGGCGCGTGTTGGCTAAAACAACTCGCGTGATAGACAAGGCTTTTCCGTGGCTACGGTTACCTTCGATTCCGAACTTTTTTGAACCGTTTGGGTTTCATTTAATGTATGGAATTGGTGGGGAAGGTCCTGAAGCATTGAAGATGGTGAAATCATTGTGTGGTTTTGCTCATAATCTTGCTTTGGAAAATGGTTGTAGTGCGGTTGCTACGGAGGTTTCTAGCTGCGAGCCTCTTCGGTTTGCGATTCCTCACTGGAAGGTTTTGTCTTGCGAAGAGGATTTGTGGTGTATTAAGAGACTTGGGGAAGATTATAGTGATGGTTCTGTTGGTGATTGGACTAAATCGCCACCTGGATTTTCCATTTTTGTTGATCCTAGAGAGTTTTAA 1245 0.4466 MGEEILSSAVVVSVREFDPNKDRESVEAVEKICEVGPSGKLSLFTDLHGDPICRVRNSPTYLMLIAEVGNETVGMIRGCIKTVTCGKKIIRQTKNTKSSESNSNHVPVFTKLAYVLGLRVSPNHRRMGVGLKLVQKMEEWFRENGAEYSYMATENDNVASVKLFTDKCGYAKFRTPSILVNPVFAHRVKTSSSKVTIMKLTPNDAESIYRNKFSTTEFFPRDIDSVLKNKLTLGTFLAVPSDGNYGPDNWAGPEAFLMDPPGSWALVSVWNCKDLFTLEVKGASRVRRVLAKTTRVIDKAFPWLRLPSIPNFFEPFGFHLMYGIGGEGPEALKMVKSLCGFAHNLALENGCSAVATEVSSCEPLRFAIPHWKVLSCEEDLWCIKRLGEDYSDGSVGDWTKSPPGFSIFVDPREF* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1925 414 PANTHER N-ACETYLTRANSFERASE 8 414 - -
Psa4g1925 414 Gene3D - 47 176 - -
Psa4g1925 414 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 8 414 - -
Psa4g1925 414 Pfam Acetyltransferase (GNAT) family 57 170 IPR000182 GO:0016407
Psa4g1925 414 CDD NAT_SF 63 148 - -
Psa4g1925 414 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 12 203 IPR000182 GO:0016407
Psa4g1925 414 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 53 172 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1925 Psa-Chr4 139754734 139757157 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Psa4g1925 Acetyltransf_1 5.4e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1925 - - gmx:100775317 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1925 4 139754734 139757157 Psa4g1925 4 139754734 139757157 ECH
Psa2g3875 2 408367323 408369147 Psa4g1925 4 139754734 139757157 PCT