Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1922 ATGAATTTCAGAACTTATTATTATTATTATTATCATCTCAACTTCTTTTTCATCATATTATTATCATCATTTTCTCTAACAACATTAAAACCGCTTCCTAACAGAAGGAACCTACACCAACCGTTTTTGTTTCCGGTGAGTTCTGCTCCGCCGCCGGAGCTCTATCCTCCTCCGCCTCCGGATACAACTCCCTCCTCCCCTGACATTCCATTTTTCAATGAGTTTCCAGCAGGAACACCACCGCCTCCGGTGGAAAACAACCAGAATGTACCGTCATCGTCCTACAACGCTACAATTGCAAATCCGACGGCGACGAAACCTACAGAGCCGGCTAAGAAAGTTGCGATTGCGGTTTCCGTTGCATTTTCGTTATTTGTGATGTTCTCTGTAGTCGCTTTCTTCTTGTATAAGCAGAGAACTAAACCTTCTTCGGAATCGGATAAAATGAAACTCGTCGGTGAGAATTCTCAAGGAGTTCTAGAAGATTCCACGATGGCTCCACAACAACCTTCAAGTTTCCTCTACATTGGAACTGTTGTGGAACCAAACGGAACGTCGGTAGGTGTAGCTAACCCTCACAAGATTAATACTATCGGTAGCCGTTACCGGCCGAGTCCCGAGTTACATCCGTTGCCGCCTCTTACGAAGTCTCTCGTCGTGGATAGTCACTCGCCACCGGCGGTGTCCTCGTCATCTTCTTCGGATAACGATGAAAGCCGCGAGACGGAGTTGGAGTTCCATTCGCGGCAGGAGTCTTCTTCTCATAATCTCAGCCGTGAAGAAAGCTATTATACGCCGGTTTCGCGTCAAAGTTCTCTTGCAAACGGAAGCCCTACCGCGCCGGTTTCGGTTTCTCCGGTGGTTCCTTTTTCCAAGAGAACTTCACCGAAATCTCGATTATCAGGTTCTTCACCGGATATCAGACACGCGATGATACCTTCCATTAAGCAAGTTGAGAAAGAAGCGACGTTAGGTGGTCCTTCTAGAAGACCGAAATTCTCATCGCCTCCACCAGCGCCTAATTTGACGCATCTTCATTCAAACGACTTAAGGGATTCACTCAGTTTACCTCCTCCACCTCCACCACCTCCGCCGCCGAGAAATTTTAAGTCGCCGGTAGTTAGTACATCCTCTTCTTCTGCTTCACGGTATCAATGGACTCAGCCACGAAGTCATGGAGAGGATTCTGCATCTGGTAACAGTTTGAGTGTCAAAAAAGTTTTCAAGGAAGATGATGAAATTGAAATGGAGGAAGGAAAACCTAAGTTGAAACCTCTGCATTGGGATAAAGTACGTGCTACTTCAGATCGTGCTACTGTATGGGACCAATTAAAATCGAGCTCATTTCAGTTAAACGAGGACATGATGGAGACTCTGTTTGGTTGTAATTCATTGAATTCTGCACCTAAACCTAAAGAAGTCTCTATTAACAGGAAACCAGTTTTTGCCTCGGTTGAACAAGAGAATAGGGTGTTAGATCCAAAGAAATCCCAAAACATAGCTATACTACTCAGGGCATTGAATGTCACAAGAGATGAGGTTTCCGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTGGGTGCTGAGTTATTGGAAACTCTAGTGAAGATGGCTCCAACGAAGGAGGAGGAAATAAAACTAAAACATTATGATGGTGACCTTTCAAAACTTGGGCCTGCAGAAAGATTTCTTAAAGCAGTGCTTGATGTCCCTTTAGCTTTTAAAAGAGTTGAAGCCATGCTATACAGAGCTAATTTTGAAACAGAAGTTAACTACCTTAAGAAGTCCTTTCAAACCTTGGAGGCAGCAAGTGAGGAACTAAAGAACAGCCGGTTATTCCTCAAACTCCTTGAAGCTGTTCTCAGGACAGGAAACAGAATGAATGTTGGAACCAATCGCGGTGATGCTAAATCTTTCAAACTAGATACACTCCTGAAACTTGCAGATATAAAAGGAACTGATGGAAAGACTACATTGCTCCATTTTGTTGTTCAAGAAATTATTAGATCTGAAGGTACAGGTGGCGAATCTGCAAATGAGAATGTTCAAAACCAAACAAATTCCCAGTTCAACGAAGATGAGTTCAAAAAGAAAGGATTACAGGTTGTGGCTGGATTGAGTAGAGACTTTGGTAATGTAAAAAAGGCAGCAGGAATGGACTCAGATGTCTTAAGCAGCTATGTCATAAAGCTTGAAATGGGGCTTGATAAAGTGAGATTGATTTTGCAATATGTAAAACCAGATATGCAAGGGAACTTCTTTAACTCAACAGAGATATTTATGAAAGATGCCGAAGAGAAAATATTAAGGATCAAAGCTGATGAGATTAGGGCCTTATTCCTTGTGAAAGAAGTTACAGAATACTTTCATGGGGATACAACAAAGGAAGAAGCCCACCCTTTCAGAATTTTTATGATTGTAAGAGACTTCCTAAATATTTTGGATCAAGTTTGCAAAGAAGTGGGAAAGATGCAGGATAAAACTGCAAGCAATTCATCCAGATCGTTTAGGATAGCCGCAAGTGCATCGTTACCTGTTCTCAACAGGTACCGTGCAAGACAAGATACAAGTTCAGATGAGGAAAGTTTATCACCCTAG 2598 0.4265 MNFRTYYYYYYHLNFFFIILLSSFSLTTLKPLPNRRNLHQPFLFPVSSAPPPELYPPPPPDTTPSSPDIPFFNEFPAGTPPPPVENNQNVPSSSYNATIANPTATKPTEPAKKVAIAVSVAFSLFVMFSVVAFFLYKQRTKPSSESDKMKLVGENSQGVLEDSTMAPQQPSSFLYIGTVVEPNGTSVGVANPHKINTIGSRYRPSPELHPLPPLTKSLVVDSHSPPAVSSSSSSDNDESRETELEFHSRQESSSHNLSREESYYTPVSRQSSLANGSPTAPVSVSPVVPFSKRTSPKSRLSGSSPDIRHAMIPSIKQVEKEATLGGPSRRPKFSSPPPAPNLTHLHSNDLRDSLSLPPPPPPPPPPRNFKSPVVSTSSSSASRYQWTQPRSHGEDSASGNSLSVKKVFKEDDEIEMEEGKPKLKPLHWDKVRATSDRATVWDQLKSSSFQLNEDMMETLFGCNSLNSAPKPKEVSINRKPVFASVEQENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEGLGAELLETLVKMAPTKEEEIKLKHYDGDLSKLGPAERFLKAVLDVPLAFKRVEAMLYRANFETEVNYLKKSFQTLEAASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKSFKLDTLLKLADIKGTDGKTTLLHFVVQEIIRSEGTGGESANENVQNQTNSQFNEDEFKKKGLQVVAGLSRDFGNVKKAAGMDSDVLSSYVIKLEMGLDKVRLILQYVKPDMQGNFFNSTEIFMKDAEEKILRIKADEIRALFLVKEVTEYFHGDTTKEEAHPFRIFMIVRDFLNILDQVCKEVGKMQDKTASNSSRSFRIAASASLPVLNRYRARQDTSSDEESLSP* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1922 865 MobiDBLite consensus disorder prediction 236 256 - -
Psa4g1922 865 PANTHER FORMIN-LIKE PROTEIN 8 865 - -
Psa4g1922 865 MobiDBLite consensus disorder prediction 257 302 - -
Psa4g1922 865 SUPERFAMILY Formin homology 2 domain (FH2 domain) 357 828 - -
Psa4g1922 865 MobiDBLite consensus disorder prediction 371 403 - -
Psa4g1922 865 ProSiteProfiles Formin homology-2 (FH2) domain profile. 413 840 IPR015425 -
Psa4g1922 865 MobiDBLite consensus disorder prediction 221 310 - -
Psa4g1922 865 SMART it6_source 413 829 IPR015425 -
Psa4g1922 865 MobiDBLite consensus disorder prediction 320 339 - -
Psa4g1922 865 PANTHER FORMIN-RELATED 8 865 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Psa4g1922 865 Pfam Formin Homology 2 Domain 417 814 IPR015425 -
Psa4g1922 865 Gene3D Formin, FH2 domain 422 843 IPR042201 -
Psa4g1922 865 MobiDBLite consensus disorder prediction 371 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1922 Psa-Chr4 139126571 139132353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1922 366 855 FH2 protein (formin) Gene Family AT5G67470 66.667 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1922 - - gmx:100803578 974.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1922 4 139126571 139132353 Psa4g1922 4 139126571 139132353 ECH
Psa2g3884 2 408869878 408873731 Psa4g1922 4 139126571 139132353 PCT