Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1870 ATGACCGGTTCACTTCTCTTTCGGTTACTCACATGTGTTTCTCCGTCATTTGCATCTCGGTGGAACTTTTTCACCGGGAAAATTCCACCGGAGTATGGTGTTTGGTCTCATCTTGAGTATCTTGCTGTTTCCGGTAATGAGCTTTCCGGACCTATTCCGCCGGAGATCGGGAACCTTACTTCACTCCGTGAGCTTTACATTGGTTATTATAATACCTACGATGGTGGTATCCCGCCGGAGATTGGTAACCTATCGGAGATGGTGAGGCTTGACGCTGCTTACTGTGGTTTAACCGGTGAGGTTCCGGCGGAGTTGGGTAAGCTTCAGAATTTGGATACTCTGTTTCTTCAGGTGAATGCGCTTTCCGGGTCTCTTACGCCGGAGCTTGGGAACCTGAAGAGCTTGAAATCTATGGATTTGTCGAACAACGGTTTTACTGGTGAAGTTCCGGTGAGTTTTGCAGAGCTGAAGAATCTTACCCTTTTGAACTTGTTTAGAAACAAGCTTCATGGAGCGATACCGGAGTTTATCGGGGAGATGCCGGCGCTTGAAGTGTTGCAGATTTGGGAGAATAACTTCACCGGAAGCATTCCTCAGAGTTTGGGGAAAAACGGGAAGCTTACACTTGTTGATGTTTCTTCAAACAAGTTAACTGGTTCTCTTCCACCTTTTATGTGTTTTGGGAACAAGCTTCAAACTTTGATAACTTTAGGGAATTTCCTTTTTGGTCCCATTCCAGATTCACTTGGAAAGTGTAAATCTTTAAGCAGAATTCGAATGGGTGAGAATTTTCTCAATGGGTCAATTCCAAAAGGACTTTTTGGTCTTCCACAGCTCACACAAGTTGAGCTTCAAGATAATCTTTTATCTGGAAACTTTCCTCAACCTGTTTCAATGTCTCCAAATCTTGGTCAAGTTACTCTTTCCAACAACAAGCTTTCTGGGCCATTACCACCTTCCATTGGAAACTTCACCAGTGTTCAAAAGCTTCTCCTTGATGGAAACCAGTTTTCAGGTGAAATCCCTTCTGAGATTGGAAAGTTACAACAGCTTTCTAAGATAGATTTTAGTCACAACAAATTCTCTGGTTCCATTGCGCCTGAGATTAGTCACTGTAAGCTTTTAACTTTTGTTGATCTTAGTCGTAACGAGCTTACCGGTGAGATTCCTAATGAAGTCACTAGCATGAGGATATTGAATTACTTGAACCTTTCAAAGAATCACCTTGTTGGTACTATTCCAGGGTCAATTTCCTCAATGCAAAGCTTAACTTCTGTTGATTTTTCATACAATAATCTAACTGGTTTGGTTCCTGGTACTGGCCAATTTAGTTACTTTAACTACACTTCTTTCCTTGGTAACCCTGGACTTTGTGGACCTTATTTGGGTCCTTGCAAAGATGGTGTTGTTAATGGCTCTCACCAAGCTCATGTCAAAGGACCACTGTCTTCTACTGTGAAGCTTTTGCTTGTTATTGGGTTGCTTGTGTGTTCCACTGTATTTGCTGTTGCCACATTCTTCATAGTTCGATCTTTGAAAAAAGCTAGCGAAGCTCGTGCGTGGAAGTTAACTGCATTCCAACGTTTGGACTTTACTGTCGACGATGTTCTTGATTCTTTGAAAGAGGATAATATCATAGGAAAAGGAGGGGCCGGTATTGTTTTCAAAGGCTCGATGCCTAACGGTGATCTTGTTGCTGTGAAAAGGTTACCTGCTATGAGTAGAGGCTCTTCACATGATCACGGTTTTAATGCCGAGATTCAAACTTTAGGGAGAATTCGACACAGACACATTGTTAGATTATTGGGTTTCTGTTCAAACCATGAAACAAATCTCCTGGTTTATGAGTACATGCCTAATGGAAGTTTAGGTGAAGTTCTTCATGGTAAGAAAGGCGGTCATTTGCATTGGGATACAAGGTATAAAATCGCTGTGGAATCTGCCAAGGGTCTTTGTTATCTACATCATGATTGTTCGCCACTTATCGTTCATCGCGACGTGAAATCAAACAATATCTTACTCGATACAAGTTTTGAAGCCCATGTTGCTGATTTTGGACTTGCTAAGTTCTTGCAAGATTCTGGAACTTCTGAATGCATGTCTGCTATTGCTGGTTCTTATGGATACATAGCTCCAGAGTATGCATACACACTGAAAGTCGATGAGAAAAGCGATGTATACAGCTTCGGTGTGGTACTCTTAGAGCTTGTAGCAGGAAGAAAACCAGTTGGAGAATTTGGCGATGGAGTCGACATTGTACAATGGGTGAGAAAAATGACCGATTCAAACAAAGAAGGTGTTCTAAAAGTTCTTGATCCAAGACTTCCTTCGGTTCCAATTCACGAGGTGATGCACGTGTTCTACGTAGCCATGCTATGCGTCGAAGAACAGGCTGTTGAAAGACCAACAATGCGCGAAGTTGTTCAAATGCTCACCGAGCTTCCGAAACCATCACAAAGTTCAAAACATGTTGAAGAGGACTTAACAACATTAACAATCACTGAATCCTCTTTGTCATCATCAAACAGTTTAGAGCCTCCAGAAAAAGAACCTAAAGATCTTCTAAGTATATGA 2574 0.4188 MTGSLLFRLLTCVSPSFASRWNFFTGKIPPEYGVWSHLEYLAVSGNELSGPIPPEIGNLTSLRELYIGYYNTYDGGIPPEIGNLSEMVRLDAAYCGLTGEVPAELGKLQNLDTLFLQVNALSGSLTPELGNLKSLKSMDLSNNGFTGEVPVSFAELKNLTLLNLFRNKLHGAIPEFIGEMPALEVLQIWENNFTGSIPQSLGKNGKLTLVDVSSNKLTGSLPPFMCFGNKLQTLITLGNFLFGPIPDSLGKCKSLSRIRMGENFLNGSIPKGLFGLPQLTQVELQDNLLSGNFPQPVSMSPNLGQVTLSNNKLSGPLPPSIGNFTSVQKLLLDGNQFSGEIPSEIGKLQQLSKIDFSHNKFSGSIAPEISHCKLLTFVDLSRNELTGEIPNEVTSMRILNYLNLSKNHLVGTIPGSISSMQSLTSVDFSYNNLTGLVPGTGQFSYFNYTSFLGNPGLCGPYLGPCKDGVVNGSHQAHVKGPLSSTVKLLLVIGLLVCSTVFAVATFFIVRSLKKASEARAWKLTAFQRLDFTVDDVLDSLKEDNIIGKGGAGIVFKGSMPNGDLVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVESAKGLCYLHHDCSPLIVHRDVKSNNILLDTSFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVAGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPIHEVMHVFYVAMLCVEEQAVERPTMREVVQMLTELPKPSQSSKHVEEDLTTLTITESSLSSSNSLEPPEKEPKDLLSI* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1870 857 Gene3D Ribonuclease Inhibitor 19 227 IPR032675 -
Psa4g1870 857 Gene3D Ribonuclease Inhibitor 229 352 IPR032675 -
Psa4g1870 857 SUPERFAMILY Protein kinase-like (PK-like) 533 811 IPR011009 -
Psa4g1870 857 Gene3D Ribonuclease Inhibitor 353 465 IPR032675 -
Psa4g1870 857 MobiDBLite consensus disorder prediction 815 845 - -
Psa4g1870 857 ProSiteProfiles Protein kinase domain profile. 540 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g1870 857 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 22 853 - -
Psa4g1870 857 Gene3D Phosphorylase Kinase; domain 1 508 617 - -
Psa4g1870 857 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 22 853 - -
Psa4g1870 857 MobiDBLite consensus disorder prediction 815 857 - -
Psa4g1870 857 Gene3D Transferase(Phosphotransferase) domain 1 618 838 - -
Psa4g1870 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 662 674 IPR008271 GO:0004672|GO:0006468
Psa4g1870 857 SUPERFAMILY RNI-like 22 290 - -
Psa4g1870 857 SUPERFAMILY L domain-like 207 465 - -
Psa4g1870 857 Pfam Protein kinase domain 542 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa4g1870 857 SMART serkin_6 540 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1870 Psa-Chr4 134876825 134880270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1870 22 857 Receptor kinase-like Gene Family AT5G65700 82.578 0.0 1402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Psa4g1870 Pkinase 8.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1870 - - gmx:100499646 1445.64