Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1850 ATGGCTGCTACATCTGGGATAGCTGAGGAGGACACGCTAGTGTCTTCCAGTGACGACATCGATCCCAGGCTGGATGTCTATGTGTGGGACATGGATGAGACCCTTATACTACTCAATTCCTTGCTGAAATCATCATATGCTGAGGCTTTTAATGGTCTGAAGGATGCGCAAAAAGGTGTCGAGCTTGGGAAGGTGTGGGAAAATCTCATTCTACAATTGTGCGATGATAATTTCTTCTACGACCAAATTGAAAATTACAATAAGCCGTTTCTTGATGTTCTGTCCAAATATGATGATGGGAGGGACCTATCTGATTATGACTTCAACAAAGATGGATTAGGCCCCCCACATGATGATGTCAACAAAAGAAAACTTGCATATAGGCATAGAGTTATAGCCCAAAAATACTTGCAGGGTTTACATAATATTTTAGATCACGAGACAATAAAAGTATGGGATGATTTGTATGGTAAAACTGATGAATATACTGACAAATGGCTTTCATCAGCACGGGCCTTTTTGGAAGAGTGTTCCGGTGAAAAGAAAGATGTGGTTTCTTCCACTGCTTATGGTAACACAAGCACTGACTCTACTAATGCAAAGCATCAGCGTGTAAATGTTCTGGTGACATCTGGATCGTTAATACCATCTCTGGTAAAATGCCTGCTCTTTCATCTCGACAGCTTAATAACACATGAAAATGTGTATAGTTCCTGGGATGTGGGGAAAACTCAATGTTTTCGATGGATAAAGGAGCGTTTCAACCATCCCAATGTTCGCTTTTGTGTAATTGGAGATGGATGGGAAGAATGTGAAGCTGCAGAAATCATGAGATGGCCATTTATCAAGATTGACCCAAGGCCAGGAAAACCTCATAGGTTCCCTGGTCTCACATCCAAAACAGTTGGCCACTATTTCTCTGTGGTGTATCCAAACAACAAGAATGATGAAGAATGA 957 0.4127 MAATSGIAEEDTLVSSSDDIDPRLDVYVWDMDETLILLNSLLKSSYAEAFNGLKDAQKGVELGKVWENLILQLCDDNFFYDQIENYNKPFLDVLSKYDDGRDLSDYDFNKDGLGPPHDDVNKRKLAYRHRVIAQKYLQGLHNILDHETIKVWDDLYGKTDEYTDKWLSSARAFLEECSGEKKDVVSSTAYGNTSTDSTNAKHQRVNVLVTSGSLIPSLVKCLLFHLDSLITHENVYSSWDVGKTQCFRWIKERFNHPNVRFCVIGDGWEECEAAEIMRWPFIKIDPRPGKPHRFPGLTSKTVGHYFSVVYPNNKNDEE* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1850 318 PANTHER EYES ABSENT 15 311 IPR028472 GO:0004725
Psa4g1850 318 TIGRFAM EYA-cons_domain: EYA conserved domain 25 302 IPR006545 GO:0007275
Psa4g1850 318 SUPERFAMILY HAD-like 28 288 IPR036412 -
Psa4g1850 318 PANTHER DEVELOPMENTAL PROTEIN EYES ABSENT 15 311 - -
Psa4g1850 318 Gene3D - 25 290 IPR038102 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1850 12 316 Protein tyrosine phosphatase (PTP) family AT2G35320 59.344 3.61e-135 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1850 - - gmx:100791661 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1850 4 132343625 132347437 Psa4g1850 4 132343625 132347437 ECH