Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1842 ATGTTTCGTAATGATTTTATTGGCACTGCTCCATACATATCATGCTTCCCTTCACTACGGCACCATAGATTATGCCCAAGAGATCAGTTCCTGATCCTCTCATCTGATGGTTTGTATCAATATCTAAACAATGACGAAGTTGTTTCTCAAGTTGAGAGCTTCATGGAAAAGTTTCCAGAAGGAGACCCTGCCCAACATTTAATAGAAGAGCTGCTCCTCCGTGCAGCTAAGAAGGCTGGAATGGATTTTCACGAGTTACTGGATATTCCGCAAGGAGATCGGAGGAAGTATCACGATGACGTTACTGTTATGGTGATATCACTTGAAGGTAGAATATGGAAATCGTCAGGGAAATATCTGTGA 363 0.4187 MFRNDFIGTAPYISCFPSLRHHRLCPRDQFLILSSDGLYQYLNNDEVVSQVESFMEKFPEGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1842 120 ProSiteProfiles PPM-type phosphatase domain profile. 1 108 IPR001932 -
Psa4g1842 120 Pfam Protein phosphatase 2C 9 77 IPR001932 -
Psa4g1842 120 PANTHER PROTEIN PHOSPHATASE 2C 5 118 IPR015655 GO:0004722|GO:0006470
Psa4g1842 120 Gene3D - 1 116 IPR036457 -
Psa4g1842 120 PANTHER PROTEIN PHOSPHATASE 2C 29 5 118 - -
Psa4g1842 120 SUPERFAMILY PP2C-like 7 109 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1842 Psa-Chr4 132030241 132033452 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1842 1 120 PP2C-type Phosphatase Gene Family AT2G35350 78.512 2.95e-61 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1842 - - mtr:MTR_4g098650 244.588