Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1841 ATGGGAAGTGGAGTTTCGAGACTGTGTTCTTGCTTAGAACCGGTTCACCGGACCAAACGAACCCAACAGAAAGACGATATTTTCACTGCAACTGAACCGTTGGATGAAACCCTAGGTCATTCTTTCTGTTACGTTAGATCTTCAGCTCGTTTTCTCTCTCCATCTCATTCTGATCGTTTTCTTTCACCTTCTACTTCTCTTCGTTTCTCACCTACCCACGAATCTCTTCCCAAAACCCGACCCGATTTTCCTGAAACTTCTTTTAAAGCCATTTCTGGTGCTTCGGTTAGTGCTAATAGTTCTGTTCCCAAAACGGTTATTCAGTTAGAAGAAGAATCCTCCGCCCCTGTTGATTCTTGCGGTGGTGTTACCAAGGGTACAATTGTCAATGGCTTTGAGAGTACGTCGTCGTTTAGTGCTCTTCCGCTTCAGCCTGTTCCCAGAGGAGGTGAGCTTTTCGAGGGGAGTGGTTTTTTTCTCTCCGGTCCGATTGAGAGCGGTGCACATTCCGGACCGATTAACGCAGCTGCTGGAGCTGATTCGGGTGTCTCCAGTGGAAGGGATGTTCCTTTCTCGGCCCCGTTAGGGGGGATGTACGCGAGGAAGAAAGGTGTGTCGGGGTTTAGGAAGGCTTTTCAACGGAAGGTGTCGGAGAAGAAGCGGCCGTGGGTGGTGCCGGTGTTGAATTTTGTTGGGAGGAAGGAGGTTCTGGGGAGTGAAGGAAAGGCGAAGCCAGTTGAGACAAAGAGTGAGAGCAATGTGCAGTGGGCTCTAGGGAAAGCTGGAGAGGATCGGGTTCATGTGGTGGTTTCGGAGGAGCAAGGGTGGTTGTTCGTTGGGATTTACGATGGTTTCAATGGTCCTGATGCCCCGGAGTTTTTGATGGGTCATATGTACCGAGCTGTTCACAATGAGCTTCAGGGTTTGTTTTGGGAAGTTGAAGAACCGATGGAGAGTCATAATCCTGTTGAGGTGAAAGAGGTGAAAAACATAACGGAGGGAGAAAATTCAAGTGCTGCTTTGGTGAATATGGTACAAAGGATTGAAACTGCTCCCGTGGCGGGAACGGAGAGTAAACGGCGTAGGCTGTGGGAATTTCTGGCTGAAGACCCTGAAGATGGACTTGATCTTTCTGGGTCTGATAGGTTTGCGTTTTCTGTTGACGATGCACTTAGTGTTAGTAATACCAATGCAGGTTCTGCCAGTAGTAGACGGTGGCTGTTGCTGTCCAAACTTAAGAATGGTTTGTCTTCTAAGCAAAAAGAGGGTAACGGTAGGAAGTTGTTGCCGTGGAATTTAGGGAATGAGGAAGAGAAAGAAGAAAAGACTGAGGTGGAAGACAAGCCTTCTGCGTCTGGCACTGGCATTGGTGGTGGGAGAAGACGGAAGTTGGGTCCAGTTGATCATGATTTGGTTTTGAATGCAATGTCCCGGGCACTTCAAGTGACCGAGCTTGCGTATTTGGATATGACCGATAAGCTTCTGGATACAAATCCTGAACTTGCTTTGATGGGTTCTTGTCTGCTGGTTGCTTTGATGAGGGATGAGGATGTGTATGTAATGAATGTTGGGGATAGTCGTGCAATTGTTGCACATTATGAGCCCAAGGAGGTTCAGGATACTTCCAATGTGGAATCTGCAAACAAGGGAGGAGATGCTGGTGTTGGTTCGAGCACCGAGAGCATAGTTGAGGAGTCCTTAGCTTTAGATGGTACTCAAACTGAAGGTGCAATCAAGGTGGGAAATCAGGGTCCTGCTCAAGAAATGAAGTTGGCAGCATTGCAGCTGTCGACTGACCACAGCACCAGCATTGAAGAAGAAATCATTAGAATTAAAAAGGAGCATCCTGATGATCCCCATTGCATAGTCAATGATAGAGTTAAAGGCCGTCTTAAGGTCACCAGAGCATTTGGGGCTGGATCTTTGAAACTGGTTGTCATAGCACCGCAATCACGCTGGAGTGATGCAGAGCAGGTTGTGGCTACCTCAGAGATTGCGTGTCACAATATAGTGGTGCAGCCGGAGTGTCGAATGTTGCACTGCAGAAATGCTGAGCAAATCATATATGGTGCACTGCAGAAATGTTGA 2088 0.4775 MGSGVSRLCSCLEPVHRTKRTQQKDDIFTATEPLDETLGHSFCYVRSSARFLSPSHSDRFLSPSTSLRFSPTHESLPKTRPDFPETSFKAISGASVSANSSVPKTVIQLEEESSAPVDSCGGVTKGTIVNGFESTSSFSALPLQPVPRGGELFEGSGFFLSGPIESGAHSGPINAAAGADSGVSSGRDVPFSAPLGGMYARKKGVSGFRKAFQRKVSEKKRPWVVPVLNFVGRKEVLGSEGKAKPVETKSESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHMYRAVHNELQGLFWEVEEPMESHNPVEVKEVKNITEGENSSAALVNMVQRIETAPVAGTESKRRRLWEFLAEDPEDGLDLSGSDRFAFSVDDALSVSNTNAGSASSRRWLLLSKLKNGLSSKQKEGNGRKLLPWNLGNEEEKEEKTEVEDKPSASGTGIGGGRRRKLGPVDHDLVLNAMSRALQVTELAYLDMTDKLLDTNPELALMGSCLLVALMRDEDVYVMNVGDSRAIVAHYEPKEVQDTSNVESANKGGDAGVGSSTESIVEESLALDGTQTEGAIKVGNQGPAQEMKLAALQLSTDHSTSIEEEIIRIKKEHPDDPHCIVNDRVKGRLKVTRAFGAGSLKLVVIAPQSRWSDAEQVVATSEIACHNIVVQPECRMLHCRNAEQIIYGALQKC* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1841 695 MobiDBLite consensus disorder prediction 432 448 - -
Psa4g1841 695 Gene3D - 236 680 IPR036457 -
Psa4g1841 695 SUPERFAMILY PP2C-like 259 645 IPR036457 -
Psa4g1841 695 SMART PP2C_4 247 693 IPR001932 -
Psa4g1841 695 CDD PP2Cc 468 648 IPR001932 -
Psa4g1841 695 MobiDBLite consensus disorder prediction 419 461 - -
Psa4g1841 695 ProSiteProfiles PPM-type phosphatase domain profile. 247 695 IPR001932 -
Psa4g1841 695 PANTHER PROTEIN PHOSPHATASE 2C 29 19 646 - -
Psa4g1841 695 Pfam Protein phosphatase 2C 594 679 IPR001932 -
Psa4g1841 695 PANTHER PROTEIN PHOSPHATASE 2C 19 646 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1841 Psa-Chr4 132021538 132024847 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1841 1 643 PP2C-type Phosphatase Gene Family AT2G35350 50.733 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1841 - - mtr:MTR_4g098650 1006.9