Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1837 ATGGGTTGCTTTCACTCCAAAACCGCTCATCTTCACTCCCCTGAAGACCCTCCTACTGATTTACCCGACTCAAACAAACCCGATCCAGGTGATGATGGAGGGGATGGTGATCAAGAAAGTCAGGTTCCAGCATTCAAAGAGTATGGTCTGAATGAACTCAGAAGGGCCACACATGAGTTTAGCACTGGTTACATTGTCTCTGAAAGTGGTGAGAAAGCTCCTAATTTGGTTTACAGAGGGAAGCTTGAGAATAATCGATTAGTTGCTGTTAAACGCTTCTCCAAACAGTCTTGGCCTGATGCTCAACAGTTTCTGGCAGAGGCAGCTGGAGTTGGGAAAGTGAGGCACAAAAGACTGGTGAATCTAATTGGGTGTTGTGCTGAAGGAGATGAAAGGCTCTTGGTAGCTGAGTACATGCCAAATGATACTTTGTCCAAACATCTCTTTCATTGGGACAAGCAACCGTTACCGTGGGAAATGCGTGTTAGAGTTGCGTATCATGTTGCACAGGCGCTAGATCATTGTAGCATGGAAAACCGGAAAATATATCATGATCTGAATGCTTATAGGATTCTTTTTGATGAGGATGGTGATCCCCGTTTATCTAGTTTCGGGCTTATGAAAAATAGTCGAGATGGGAAAAGCTACAGTACTAATCTGGCCTATACTCCACCTGAATTTTTGCGAACAGGTAGGATAATAGCAGAAAGTGTGATCTACAGCTACGGTACTGTCCTACTGGATCTTTTGAGCGGCAAGCATATTCCCCCAAGCCATGCTTTGGACCTAATTAGAGGGAAAAATGCGTTGTTGTTGATGGACTCATCCTTAGAAGGGCAATATGCAAATGATGATGCTACAAAGTTGGTTGAGCTTGCGTCAAAATGTCTTCAGTTTGAGGCCAGAGAAAGACCTGATACTAAGTTTCTTCTCACTGCCGTTACACCTCTTCAAAAGCAGAAAGAGGTAGCATCTCATGTGTTAATGGGCCTTACTAAAACAGCGGCAGTGCTACCGCTACCAACTATGCTTTCTCCTCTTGGAAAGGCTTGTGCAAGGATGGATCTTACTGCTATTCATGATATATTGTTAAAAACAGGTTATAAAGATGAAGAAGGCGCCGAAAACGAGCTTTCATTTCAAGAGTGGACACAACAAGTGCAAGACATCTTAAACACAAAAAAGTTCGGCGATATTGCATTTAGAGACAAGGATTTCAAGAATGCAATTGAGTATTATTCCAAGTTGGTGGTTATGATGTCTGTTCCCTCCGCGACCGTCTTTGCAAGGAGAGCCTTCTCCTACCTGATGAACGAACAGGCGGAACTTGCATTAAGAGACGCAATGCAGGCGCAGGTATGCATACCTGATTGGCCAACTGCATTCTACCTACAAGCTCTTGCTCTCTCAAAGCTGGGAATGGAAACCGACGCACAGGACATGCTTAACGACGGAGCAGCCTTCGAAGCAAAGAGATCTAACAGCTGGCGCAATTAA 1497 0.4429 MGCFHSKTAHLHSPEDPPTDLPDSNKPDPGDDGGDGDQESQVPAFKEYGLNELRRATHEFSTGYIVSESGEKAPNLVYRGKLENNRLVAVKRFSKQSWPDAQQFLAEAAGVGKVRHKRLVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSMENRKIYHDLNAYRILFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIAESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNALLLMDSSLEGQYANDDATKLVELASKCLQFEARERPDTKFLLTAVTPLQKQKEVASHVLMGLTKTAAVLPLPTMLSPLGKACARMDLTAIHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRAFSYLMNEQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMETDAQDMLNDGAAFEAKRSNSWRN* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1837 498 Gene3D Transferase(Phosphotransferase) domain 1 140 332 - -
Psa4g1837 498 Gene3D Tetratricopeptide repeat domain 388 497 IPR011990 GO:0005515
Psa4g1837 498 Gene3D Phosphorylase Kinase; domain 1 35 138 - -
Psa4g1837 498 MobiDBLite consensus disorder prediction 1 40 - -
Psa4g1837 498 MobiDBLite consensus disorder prediction 9 33 - -
Psa4g1837 498 SUPERFAMILY TPR-like 389 490 IPR011990 GO:0005515
Psa4g1837 498 Pfam Protein tyrosine and serine/threonine kinase 77 310 IPR001245 GO:0004672|GO:0006468
Psa4g1837 498 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 497 IPR045845 GO:0004672|GO:0009742
Psa4g1837 498 SUPERFAMILY Protein kinase-like (PK-like) 44 314 IPR011009 -
Psa4g1837 498 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK2 1 497 - -
Psa4g1837 498 ProSiteProfiles Protein kinase domain profile. 63 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1837 Psa-Chr4 131578261 131582824 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1837 14 314 Glycoside Hydrolase AT3G07070 33.846 4.14e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Psa4g1837 PK_Tyr_Ser-Thr 1.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1837 K14500 - gmx:100793576 920.228