Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1829 ATGCACCCAACCAACACAAGTTTTAGCTTATGGAATTCAAATTCAACTCATCAGCTTTTTTTTTTCTTCATTCCAAGAAGGAATTGGATTGTGTTTGACGAGAGGTTGAGAAGGATGCTAAGCCAGCTATGGTTTGTACTGCCACATGATTTACAACAATGGAAGGATTTTCCCAAAGGACTCAAGGTTCTTCTCCTTCAGGAAGACATTACTTGTGCTTCTGAGATAAAGAACAAGCTTGAGGCCATGGACTATATGGTGAGTTCGCACAGTTGCGAGGGAGGTTTCAAATTTCTTGAGAATACAAAGGAACTTGCCAACCATTATTTTGATGCAGTGACTTCAAAGAACGATTGTCTGAACACCATGATGAAGTGCATAGCGGCGTTCAATGCTGGGGTAAGTGTCCTGTCGGAATCACTGAAACCTGTCAAGGAATCTTGTAGTCTCCATCTTGCAGCTCCAAACAGACATGAACAACACGAGATAGAGCCTCGGTCGAGATAG 507 0.4241 MHPTNTSFSLWNSNSTHQLFFFFIPRRNWIVFDERLRRMLSQLWFVLPHDLQQWKDFPKGLKVLLLQEDITCASEIKNKLEAMDYMVSSHSCEGGFKFLENTKELANHYFDAVTSKNDCLNTMMKCIAAFNAGVSVLSESLKPVKESCSLHLAAPNRHEQHEIEPRSR* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1829 168 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR2 87 128 - -
Psa4g1829 168 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR2 49 92 - -
Psa4g1829 168 PANTHER TRANSCRIPTION ACTIVATOR GLK1 49 92 IPR044825 GO:0003700|GO:0045893
Psa4g1829 168 PANTHER TRANSCRIPTION ACTIVATOR GLK1 87 128 IPR044825 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1829 Psa-Chr4 130452951 130454769 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1829 45 167 Response Regulator Gene Family AT4G18020 30.435 3.08e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1829 - - mtr:MTR_4g098870 124.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g3967 2 413973299 413977899 Psa4g1829 4 130452951 130454769 PCT