Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1815 ATGTCATCATCTTCATCAATGACATTGAAAGGTGACTACATGGTGAGACCGAAGGAACCAACATGGCATGGTTGTTTACCATTATTTGAATGGAGTCTAACAGTTGCCGATGGACAAAGCGTGACGCATTTCATTTCTGAATGGGCTCAAGTTGCACGTGGAGAGCCTTTGAAAAGGATTCCATATCTAGATAGAAACATATTGCGTGGTGGAGAACCATGCAACAATATTAATGACTGGGAATTTGAACAACTTCCACGTTTGTTGAAAAATTTGGATAATAGTTTTGAAGAAAGGAAGGAAAAAACAACCAATGCTATAATCAAAGTGAGTAAAAACCAACTTGAAAAGTTGAGAAAAACAGCGAATGAGAGCTGGAATAAACCTAGTAATGATCGAGGTTATTCAATATATGAAACAATAACCGGTCATATTTGGAGAAGTGCGTGTAAAGCTAGAGGCCATGAAAATAACCAACCAACTGCGATTGGCGTCTGCGTTGATTGGAGGAGTCGCGTTAAACCTAGTTTACCAAAAGAGTCTTTTGGGAATGCGATATTGGATGTGTTGGCTACTAGTCTCGCAGGTGATTTGATGTCTAAGCCATTAGGGTATGCTTCGAGTAGGATAAGAGAAGCAATAGAGAAGGTGAATGATGAGTATGTGAGGTCGGGGGTTGAGTATTTTAAAAAGCAATATGATTTAACTAAATTTCAAGATATTCATTGTATACAGAGTGACGACCACATGCCTTTTTATCGGAATCCTAATTTAATAGTCGTTAGTTGGTTGAAATTGCCTATTTATGGAATTGATTTTGGATGGGGAAAAGAGATTTATATGGGGCCAGGATTTCATGAAGAACTTGAAGGAGATTCGTTGATTCTTCCTAGTTCTCATGATGATGGATCTTTGTTGATTTTTATGTGTCTGCAAGAGGTCCATATGGATGCATTTAAGAGACATTTTTATGAAGGTGCTGAGTTTGAATTCCTTAAGGGAAGATTGTAA 1011 0.3788 MSSSSSMTLKGDYMVRPKEPTWHGCLPLFEWSLTVADGQSVTHFISEWAQVARGEPLKRIPYLDRNILRGGEPCNNINDWEFEQLPRLLKNLDNSFEERKEKTTNAIIKVSKNQLEKLRKTANESWNKPSNDRGYSIYETITGHIWRSACKARGHENNQPTAIGVCVDWRSRVKPSLPKESFGNAILDVLATSLAGDLMSKPLGYASSRIREAIEKVNDEYVRSGVEYFKKQYDLTKFQDIHCIQSDDHMPFYRNPNLIVVSWLKLPIYGIDFGWGKEIYMGPGFHEELEGDSLILPSSHDDGSLLIFMCLQEVHMDAFKRHFYEGAEFEFLKGRL* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1815 336 Pfam Transferase family 34 325 - -
Psa4g1815 336 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 31 325 - -
Psa4g1815 336 Gene3D - 92 326 IPR023213 -
Psa4g1815 336 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 31 325 - -
Psa4g1815 336 Gene3D - 19 83 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1815 Psa-Chr4 128757285 128758682 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1815 35 325 Monolignol Biosynthesis Gene Families AT5G48930 39.590 4.08e-66 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1815 K13065 - gmx:100777532 349.362