Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1814 ATGCGCAACTTCACTTCCGATCAAAGATCAAATGCTGTTGGTATTTCACAGTCTCTGGCTATGGCATATGTTATGGATCAGAAAGCAATGTTACTTCAGCAATCAACATGGCAAAATAATGTCAGGATGAATAATTTGGTTGAGCAAATCCATGGTCCACTTTCAAGCATTCAATCCTTGAGTAAAATCCTGTCTACACAAACAAACAAAAGTCAGATTTCACATGACATTGTTGAGGATATCTTGGTGCTAGGTGATCGTTTGAGGGATGTTCTCCATCAACTTCAGGATGCTGAAGAAAGGTTGAAGCGTTATAAAGGTTTTAAGGAGAGACATACCAGGTTTCTTGTAGCAACCGATTTGGTTGGCAGAGGAATTGACATTGAACGCGTGAATATTGTGACGAACTATGACATGCCTGACTCTGCAGACACATACTTACACAGAGTTGGCCGAGCTGGAAGGTTTGGCACCAAAGGCCTTGCAATTACATTTGTTTCATGTTCATCCGATGTTGATGTTCTCAATAATGTTCAGTCCCGCAACGAATCCCAGGATATAGGAAGCCGTTCTGAACTTCCTAGGGCGCCAAAATTGGCGAGTGGCCCAAAGGCATCTGAGCTAAAAGCAAAGGTTGAAGCTGAGCAGCATGCACTTCGAAGATTGCGAATGTGCCTTAGAGATGTTTGCAACCGGATATTAACCCAATGGACATTGCTACTATCCTGCGGCAACGGATCCAAGCAAATCCATTGGCCACCGTGA 765 0.434 MRNFTSDQRSNAVGISQSLAMAYVMDQKAMLLQQSTWQNNVRMNNLVEQIHGPLSSIQSLSKILSTQTNKSQISHDIVEDILVLGDRLRDVLHQLQDAEERLKRYKGFKERHTRFLVATDLVGRGIDIERVNIVTNYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCSSDVDVLNNVQSRNESQDIGSRSELPRAPKLASGPKASELKAKVEAEQHALRRLRMCLRDVCNRILTQWTLLLSCGNGSKQIHWPP* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1814 254 MobiDBLite consensus disorder prediction 181 207 - -
Psa4g1814 254 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 46 201 IPR001650 -
Psa4g1814 254 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 176 IPR027417 -
Psa4g1814 254 Pfam Helicase conserved C-terminal domain 91 157 IPR001650 -
Psa4g1814 254 Gene3D - 42 190 IPR027417 -
Psa4g1814 254 CDD SF2_C_DEAD 91 166 - -
Psa4g1814 254 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 92 192 - -
Psa4g1814 254 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 56-LIKE 92 192 - -
Psa4g1814 254 SMART helicmild6 76 157 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1814 Psa-Chr4 128609632 128610789 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1814 92 194 Eukaryotic Initiation Factors Gene Family AT5G11170 74.757 1.76e-44 151