Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1709 ATGACGCGACGTTGTTCCCATTGCAGCCACAATGGGCACAACTCAAGAACGTGTCCCAACCGTGGCGTTAAGCTTTTCGGAGTTCGATTAACCGATGGGATCCGAAAGAGTGCTAGTATGGGTAATCTTAGTCATTATACTGGTTCCGGGTCTGGATCCCTTCATACCGGGTTAAATAATCTCGATTCACCCGGTGAAACACCTGATCACGCCGCCGTTGCTGACGGCTACGCCTCTGAGGATTTTGTTCCTGGCTCTTCTTCTACTTCCCGTGAAAGAAAAAAGGGTACTCCCTGGACTGAGGAGGAGCATAGAATGTTCTTACTTGGATTGCAGAAGCTGGGCAAAGGTGACTGGCGTGGAATTGCTAGGAACTATGTTATATCAAGGACACCTACTCAAGTGGCCAGTCATGCTCAGAAATATTTCATCAGGCAAAGCAACGTGTCTAGGAGGAAAAGACGGTCCAGCTTATTCGATATTGTTCAAGATGATGCTGCTGACACTTCAATGGTACCACAAGACTTCATGTCAGCTAATCCGCTACAGACTGAAACAGAAGGCAATAACCCTTTGCCTGCTCCTCCCCCACTCGATGAAGAATGCGAATCCATGGATTCCACAAACTCAAATGACGGAGAGTCTGCCTCTATCCCATTATTAAAGCCTGATAGCAATGCACAAACAGCGTCATATCCGGTAGTATATCCGGCCTATTATTCTCCATTCTTCCCATTTCCTCTTCCCTATTGGTCTGGATACAGTCCGGAGCCCGCTCCTAAGAACGAGACACATGAAGTGGTGAAGCCAACCGCAGTACATTCCAAGGCCCCGATCAATGTCGATGAACTGGTTGGCATGTCAAAACTGAGTTTAGGAGAGACTATTGGTGATGCCGGCCCCTCGACTCTGTCTCGTAAACTACTCGAAGAAGGACCTTCTAGACAGTCGGCTTTTCATGCAACACCAGCTTGTGGAACTGTTCTGTGA 990 0.4798 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGIRKSASMGNLSHYTGSGSGSLHTGLNNLDSPGETPDHAAVADGYASEDFVPGSSSTSRERKKGTPWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVQDDAADTSMVPQDFMSANPLQTETEGNNPLPAPPPLDEECESMDSTNSNDGESASIPLLKPDSNAQTASYPVVYPAYYSPFFPFPLPYWSGYSPEPAPKNETHEVVKPTAVHSKAPINVDELVGMSKLSLGETIGDAGPSTLSRKLLEEGPSRQSAFHATPACGTVL* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1709 329 ProSiteProfiles Myb-like domain profile. 91 143 IPR001005 -
Psa4g1709 329 PANTHER BNAC01G21010D PROTEIN 1 327 - -
Psa4g1709 329 MobiDBLite consensus disorder prediction 201 222 - -
Psa4g1709 329 SUPERFAMILY Homeodomain-like 93 148 IPR009057 -
Psa4g1709 329 Gene3D - 97 149 - -
Psa4g1709 329 ProSiteProfiles SANT domain profile. 94 147 IPR017884 -
Psa4g1709 329 PANTHER TRANSCRIPTION FACTOR KUA1 1 327 - -
Psa4g1709 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 147 IPR017930 -
Psa4g1709 329 CDD SANT 98 143 IPR001005 -
Psa4g1709 329 MobiDBLite consensus disorder prediction 208 222 - -
Psa4g1709 329 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 94 146 IPR006447 GO:0003677
Psa4g1709 329 MobiDBLite consensus disorder prediction 80 100 - -
Psa4g1709 329 SMART sant 95 145 IPR001005 -
Psa4g1709 329 Pfam Myb-like DNA-binding domain 98 143 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1709 Psa-Chr4 120112579 120115460 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Psa4g1709 Myb_DNA-binding 1.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1709 - - cam:101491712 569.696