Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1703 ATGGTTGCCTTAACCCTCCAAAGATTTGTCAATGCATGTTCTTGTAGGCTATCAATTTCGCTTACACCACTACCTAATCTACCTAAAACAAATGAAGAAGAGGATTTGATTCTTAGGCTTCACAAACTTCTAGGAAACAGGTGGTCTTTGATAGCTGGGAGGCTTCCGGGACGAACCGACAATGAAATTAAGAACTATTGGAATTCTCATTTGTGCAAAAAAGCCAGTCACGTTGAAGAAAAACCAGAAACTTCCACAACACAAGAAACTATAGTTCAAGACAATATTATTGGGGGTAGTGTTATGTTAGAGAATAAAGATTCAATTAGTGGAAGTGTCGATTCAGATGTTATCTTTGATGTGAATGAATTCTTAAACTTTTCCAATGATGTATCGTATGAGTTTGATTGGGTGAATAAACTCTTGGAATTCGAGCAGATTCAGTTTCCTGAGAACACAAATATCTGA 468 0.3675 MVALTLQRFVNACSCRLSISLTPLPNLPKTNEEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKASHVEEKPETSTTQETIVQDNIIGGSVMLENKDSISGSVDSDVIFDVNEFLNFSNDVSYEFDWVNKLLEFEQIQFPENTNI* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1703 155 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 75 IPR017930 -
Psa4g1703 155 ProSiteProfiles Myb-like domain profile. 30 71 IPR001005 -
Psa4g1703 155 Pfam Myb-like DNA-binding domain 30 71 IPR001005 -
Psa4g1703 155 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 14 148 - -
Psa4g1703 155 SMART sant 25 73 IPR001005 -
Psa4g1703 155 PANTHER TRANSCRIPTION FACTOR MYB114-LIKE 14 148 - -
Psa4g1703 155 CDD SANT 30 71 IPR001005 -
Psa4g1703 155 Gene3D - 30 95 - -
Psa4g1703 155 SUPERFAMILY Homeodomain-like 30 75 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1703 Psa-Chr4 119657035 119658063 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1703 14 97 MYB Transcription Factor Family AT5G52600 51.724 1.22e-23 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Psa4g1703 Myb_DNA-binding 6.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1703 K09422 - gmx:100799575 153.295