Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1690 ATGGGTAAGGTTCATGGATCTTTGGCCCGTGCCGGGAAAGTGAGAGGGCAAACTCCTAAGGTTGCGAAGCAAGACAAGAAGAAGAAGCCACGTGGTCGTGCTCACAAGCGTATGCAATACAATCGCCGATTCGTCACCGCCGTTGTGGGATTCGGTAAGAAGCGTGGACCTAACTCATCTGAGAAGTGA 189 0.5185 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK* 63
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1690 62 MobiDBLite consensus disorder prediction 1 40 - -
Psa4g1690 62 MobiDBLite consensus disorder prediction 22 40 - -
Psa4g1690 62 PANTHER 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI 1 62 - -
Psa4g1690 62 Pfam Ribosomal protein S30 3 59 IPR006846 GO:0003735|GO:0005840|GO:0006412
Psa4g1690 62 PANTHER 40S RIBOSOMAL PROTEIN S30 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1690 Psa-Chr4 118987765 118989653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1690 1 62 Cytoplasmic Ribosomal Protein Gene Family AT5G56670 96.774 1.14e-30 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1690 K02983 - egt:105965546 118.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa2g4058 2 417634549 417635672 Psa4g1690 4 118987765 118989653 PCT