Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1662 ATGGATTTGAAGCCTTCTCATGCTTCTCCAATTCTTAATGATCCTGTTCCTGCCAACAAGTCAAGGCTTGGAATCCATTCTAGTTTGTTAGCTTGTTCGCAGCAAGATTCACCACTCTCTCCAGGGAAGTACCCAAAATCCAATTCAAAGAAATCCATGGGAGGTCTTGATGATGTTAGGTCTAACGGTATGTTGGATGCTATGAAAGCATCTTCTCCTCCGAGGAAAAAGTCGATACTTAAAGGTTCGAGTGCCCAAGTTGCTTCATTTGACTACGACATTGAAGATTATAATTTATGGATGCAAGGATATCCTTCAGCACTAGAAGCTTTTGAGGAAATCATCGACTGTGCAAAGGATAAGAAGATTGCAATGTTTCTTGATTATGATGGCACGCTTTCGCCTATAGTAGAGGATCCTGATTGTGCTTTCATGTCTGAACCTATGCGAAAAACTGTGAGAAGAGTGGCAAAATATTTCCCTACCGCGATCATTAGTGGAAGAAGCCGTGACAAGGTATTTGATTTAGTTAAACTAACAGAACTCTACTACGCCGGTAGTCATGGGATGGATATTATTGGCCCTGGTAGTGACACTATGTCCATAAACCATCCAAATTGTGTTAAGTCTACTGACCATCAGGGAAAGGAGATAACTCTCTTTCAGCCGGCAAGAGAATTCCTTCCTATGATCGATGAGGTTTTTAAAACCCTCATTGACATTACTAAAGATATAGAAGGCGCAAAGGTTGAAAATCACAAGTTTTGTGCTTCTGTACATTACCGTAATGTAGAAGAGAATAAGTGGACATTGATCGGTCAACGTGTCCATGATATGTTAAAAAATTACCCTCGTTTACGTTCAACTCATGGACGGAAGGTTTTAGAAATCCGTCCTGTAATTGACTGGAACAAAGGAAAAGCTGTTGAGTTTTTACTTGAATCACTAGGGTTAACTGATAGAAATGATGTACTTCCCATATATATTGGAGATGATAAAACTGATGAAGATGCATTTAAGGCTCTGAGGGAGAGCAATCTAGGTTATGGGATATTGGTTTCATCAGTGGGAAAAGAAAGCAATGCTTTTTACTCTCTCCGAGACACCAATGAGGTTATGAAATTTCTCCAACTCTTGGTGAATTGGAAGAGGGAGCAAGAAAGAAAGCATGGGAAGGAATAA 1182 0.3993 MDLKPSHASPILNDPVPANKSRLGIHSSLLACSQQDSPLSPGKYPKSNSKKSMGGLDDVRSNGMLDAMKASSPPRKKSILKGSSAQVASFDYDIEDYNLWMQGYPSALEAFEEIIDCAKDKKIAMFLDYDGTLSPIVEDPDCAFMSEPMRKTVRRVAKYFPTAIISGRSRDKVFDLVKLTELYYAGSHGMDIIGPGSDTMSINHPNCVKSTDHQGKEITLFQPAREFLPMIDEVFKTLIDITKDIEGAKVENHKFCASVHYRNVEENKWTLIGQRVHDMLKNYPRLRSTHGRKVLEIRPVIDWNKGKAVEFLLESLGLTDRNDVLPIYIGDDKTDEDAFKALRESNLGYGILVSSVGKESNAFYSLRDTNEVMKFLQLLVNWKREQERKHGKE* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1662 393 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 125 343 IPR006379 -
Psa4g1662 393 MobiDBLite consensus disorder prediction 31 55 - -
Psa4g1662 393 Pfam Trehalose-phosphatase 126 369 IPR003337 GO:0003824|GO:0005992
Psa4g1662 393 Gene3D - 224 393 IPR023214 -
Psa4g1662 393 Gene3D - 123 214 IPR023214 -
Psa4g1662 393 TIGRFAM T6PP: trehalose-phosphatase 121 380 IPR003337 GO:0003824|GO:0005992
Psa4g1662 393 CDD HAD_TPP 124 374 - -
Psa4g1662 393 MobiDBLite consensus disorder prediction 31 47 - -
Psa4g1662 393 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 389 IPR044651 GO:0004805|GO:0005992
Psa4g1662 393 SUPERFAMILY HAD-like 124 383 IPR036412 -
Psa4g1662 393 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED 1 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1662 Psa-Chr4 117446584 117451504 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1662 119 379 Trehalose Biosynthesis Gene Families AT1G70290 26.241 1.96e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1662 K01087 - tcc:18606311 541.191