Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1613 ATGGAGGCTAGTGGCGGTGTTAGTGGTGGCGTTACGGTGGTGGGATCGGATGCTCCGTCAGAGTTCCATGTAGCACCGAGAACCGAGAACCAAACTCCGACCGGTGGATCGGTAGTTCAGTTTACTACAGCGGTCCAAGGAAATTCTCAGCCGCAGAATCCGCCGCATGCGGCGGTGGTAACGGTGGTCCCGGCAGATACGACGGTTCCTGAGAAGAAGAAGAGAGGCCGGCCGAGAAAGTATGCAGCGGACGGTTCGGTGAGGATAGCGCTGTCTCCGAAGCCGATATCTTCCTCTGCTCCGTTGCCACCGGTGATCGATTTCACGGCGGAGAAGCGTGCGAAGGTGCGGCCGGTTAGCTCGGTGAGCAAAGGCAAATTCGAGTTGGAAAATATAGGTGAATGGGTCCCTTGCTCAACTAGTTCAAATTTCACACCTCACATCATCACTGTTAATACTGGAGAGGATGTTACTATGAAAGTAATATCATTTTCTCAGCAAGGGCCTCGAGCTCTATGTGTTCTTTCAGCAAATGGTGTCATAAAAAGTGTCACACTTCGTCAGCCCGATGCTTCTGGGGGCACATTGACATATGAGGGACTATTTGAAATTCTTTCTTTATCTGGTTCATTCATGCCAAATGATAGCGGAGGAACACGAAGCAGGTCAGGTGGTCTGAGTGTTTCTTTATCAAGTCCTGATGGCCGTGTTGTTGGTGGAGGAGTTGCTGGTCTATTGGTGGCTGCAAGTCCAGTGCAGGTAGTGGTTGGTAGTTTTATGGCAGGAAACCAACATGAGCAGAAGGCGAGAAATCAGAAACACGATGTGATATCAACTGTGACAACTACTGCTATTGTTCCCATCCCTACTCTTGATCCAATTCCTATTCTATCATCAGTTACTTCCTTCCGCGGAGATAATTGGTCTGCTGTGCAGGCGCCAGAAACGAAAGACAAGCCTGTTTCTGACATTAACGTGTCACTTCCTGGCGGTTAA 996 0.497 MEASGGVSGGVTVVGSDAPSEFHVAPRTENQTPTGGSVVQFTTAVQGNSQPQNPPHAAVVTVVPADTTVPEKKKRGRPRKYAADGSVRIALSPKPISSSAPLPPVIDFTAEKRAKVRPVSSVSKGKFELENIGEWVPCSTSSNFTPHIITVNTGEDVTMKVISFSQQGPRALCVLSANGVIKSVTLRQPDASGGTLTYEGLFEILSLSGSFMPNDSGGTRSRSGGLSVSLSSPDGRVVGGGVAGLLVAASPVQVVVGSFMAGNQHEQKARNQKHDVISTVTTTAIVPIPTLDPIPILSSVTSFRGDNWSAVQAPETKDKPVSDINVSLPGG* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1613 331 SUPERFAMILY AF0104/ALDC/Ptd012-like 142 262 - -
Psa4g1613 331 Pfam Plants and Prokaryotes Conserved (PCC) domain 146 259 IPR005175 -
Psa4g1613 331 ProSiteProfiles PPC domain profile profile. 141 282 IPR005175 -
Psa4g1613 331 CDD DUF296 145 217 IPR005175 -
Psa4g1613 331 MobiDBLite consensus disorder prediction 311 331 - -
Psa4g1613 331 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 9 329 IPR039605 GO:0003680
Psa4g1613 331 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 9 329 - -
Psa4g1613 331 MobiDBLite consensus disorder prediction 1 34 - -
Psa4g1613 331 Gene3D - 146 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1613 Psa-Chr4 112829535 112833090 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1613 1 328 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 57.983 2.46e-117 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1613 - - gmx:100801730 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1613 4 112829535 112833090 Psa4g1613 4 112829535 112833090 ECH