Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1582 ATGTGTTCAAGCAATCAAGTAAACATCCTGAGGAGAAACGATTTGATGTGCTGTACCGGTGCCCACATCAAAGCATCACTCCCATGGGATTCTTCAATTTCTGAATATTTTTGCTTTGAATACTGGATTCTTGTGTATCAACTGAAAACATGCAGCTGCTGGATGCAATTCGCATGGCAGCAACTTGCACTGGATTTTGACCTCCATTCAGGTTATGCACCATCATTTGTTGTTGTTGCTGCTGTAGTTTGTGCTATGGTTGATTTGCTGCTACTATGCATGTTGATCCGTCATGAAAGTTTTGCAGGTTTGAGGAACATGTGTCGAAGTGAGTGCGAAAACCAAAATTCATGTGCATTACTTTGTCAAATTCACAATGTATGTGCCATGTTTGATCATGATTTGGTTGATGCCGCTGTGATTTCACTATGGCTTTGTTGCAGGGGTCATGGCAGGTTGAGAATGAACGAGATGTTTCCTGATACAAATCAGCTTACCATCTTCTATAACGGGAATATTTGTAGCTATAACGGAATTCCAGCGGAAAAGATGCAAGGAATAATGCTCCTGGTTGCTGCTGCTGCCAAGTCTACGGAAACGAAGAATACCATGAAACAATCTCCTGTTCCTTCACCGATTCCCTCAAGCCCACCTTCTCCAGTTGCTGATAATGTCACTTCACCGCAGGCACTCTGCTTTCCTTATCCGTCTTCGCCAAAAAATGAAGGTGGCTGA 735 0.4299 MCSSNQVNILRRNDLMCCTGAHIKASLPWDSSISEYFCFEYWILVYQLKTCSCWMQFAWQQLALDFDLHSGYAPSFVVVAAVVCAMVDLLLLCMLIRHESFAGLRNMCRSECENQNSCALLCQIHNVCAMFDHDLVDAAVISLWLCCRGHGRLRMNEMFPDTNQLTIFYNGNICSYNGIPAEKMQGIMLLVAAAAKSTETKNTMKQSPVPSPIPSSPPSPVADNVTSPQALCFPYPSSPKNEGG* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1582 244 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 155 231 IPR040390 -
Psa4g1582 244 Pfam tify domain 161 191 IPR010399 -
Psa4g1582 244 PANTHER DIVERGENT CCT MOTIF PROTEIN 155 231 - -
Psa4g1582 244 MobiDBLite consensus disorder prediction 200 224 - -
Psa4g1582 244 SMART tify_2 158 193 IPR010399 -
Psa4g1582 244 ProSiteProfiles Tify domain profile. 158 193 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1582 Psa-Chr4 110167927 110170313 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1582 122 234 Tify Gene Family AT5G20900 34.167 3.13e-11 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Psa4g1582 tify 9.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1582 K13464 - gmx:100306045 83.5741