Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa4g1578 ATGGCTTCAAATATTTGCAAACCTTCTCGTCGCGATCATTCACTAATAAAACCAACCAAATGTGCTTCAAAGCCTACCCTTTTACTCAAAGACTACCTCAGGGACGATCTGAGTTCGTGTTCATCGAGCGGTTTCAAATCATTCCCGCGAAGACAATGCTGCACCACCGTTGGATTTGTCAAGGAAAAAGATCTCAAACTACAACGCAAGAAGAGGAGCACTACAAGTACACTCCCTCGACGGCAGCCCACCGTAACCGCTCTGCAGAGAGCTTCCGGAGCAGTAATAACAGCCATCAAGTCATTGTCCTCACAAAAGAAAGCTTCTACCGGTGTTCTTTCTAGAAGCTTCTCGAGGAAGCTGTTAAGCCGAAGGTTCTGGAGAAAAGCTGGGAAGGAAGAGGGAAGAGAAGGTGCACTGAGGCGTAGGAGATCTTTCCGGGAACTTCTTATCCAGGAACGAGATTATAAACCGACGTCGTTCGATGAGGATACTGTTTTCACTCCCAAAACCACCACCACCGTCTCTTCAGGCTGTTGCGGTAACAGCTGGGGAGAAAGTGAATTCACGTTTTCATCAAACGCTACTTCCTCCGACAGCTCCACTGAAAATGACCTAGTTGACGGCGTCAAAGACGGACCTCTCCATCAGCACAAGATAGAAGCCGTAACGCATGGGGATTGGTCAAATGAGAAGGAACAATTCAGCCCTGTATCAATACTAGATTGCCCATTTGAAGATGAAGAAGAGATGAAATCTAGTTTCATGATTAATTCTTTTTTCCAAGAAGCAGAAAATAAACATATACAGAAGACACTACATTTTGAGAACATATCTTCATCGGAGCCATTGGTTTTAGAGAAAAGGATCAAATGCTTAGAGCTAGAAGACGAACCACAGAACTATTCTTCAAAACAATGTTCATTGTCAGTAATTGAGTCAATTATTGGAGACAACAAAAACAAGGATGAGCTAAACAGTTTGATGATTAACACCGAGAAACTACTATTTGATTACTTAGAACAAAGCATTGAAGAAAACAATAATGCTAATCATCCAAAGAATCTTAGCCTTTGCAATGTAGTTGATGATTGGATGCGAGGGAAACCCCAAGAACCGTATTTGAGTTGGGAAGTGAAAGAAGGACGACATGTCTACATTAGTGAGATGGAGAGATGTGAAGAGTGGAAGAATTATGATCAAGAAACAAGACAACTTGTTCTAGAGTTGGAAAATGATGTCTTAACTAGTTTGGTTAACGAGATTGTCATTGATATTGTGATATGCTAG 1290 0.4186 MASNICKPSRRDHSLIKPTKCASKPTLLLKDYLRDDLSSCSSSGFKSFPRRQCCTTVGFVKEKDLKLQRKKRSTTSTLPRRQPTVTALQRASGAVITAIKSLSSQKKASTGVLSRSFSRKLLSRRFWRKAGKEEGREGALRRRRSFRELLIQERDYKPTSFDEDTVFTPKTTTTVSSGCCGNSWGESEFTFSSNATSSDSSTENDLVDGVKDGPLHQHKIEAVTHGDWSNEKEQFSPVSILDCPFEDEEEMKSSFMINSFFQEAENKHIQKTLHFENISSSEPLVLEKRIKCLELEDEPQNYSSKQCSLSVIESIIGDNKNKDELNSLMINTEKLLFDYLEQSIEENNNANHPKNLSLCNVVDDWMRGKPQEPYLSWEVKEGRHVYISEMERCEEWKNYDQETRQLVLELENDVLTSLVNEIVIDIVIC* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa4g1578 429 PANTHER OS04G0572500 PROTEIN 9 426 - -
Psa4g1578 429 PANTHER OS04G0572500 PROTEIN 9 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa4g1578 Psa-Chr4 109940712 109943169 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa4g1578 9 426 TRM (TON1 Recruiting Motif) Superfamily AT4G23020 29.851 1.23e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa4g1578 - - cam:101506843 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa4g1578 4 109940712 109943169 Psa4g1578 4 109940712 109943169 ECH